DiversitySampler: Functions for re-sampling a community matrix to compute diversity indices at different sampling levels.
Version 2.1

There are two functions in this package, which can be used together to estimate the Shannon's Diversity index at different levels of sample size. A Monte-Carlo procedure is used to re-sample a given observation at each level of sampling. The expectation being that the mean of the re-sampling will approach Shannon's diversity index at that sample level.

Browse man pages Browse package API and functions Browse package files

AuthorMatthew K. Lau
Date of publication2012-12-22 07:37:03
MaintainerMatthew K. Lau <mkl48@nau.edu>
LicenseGPL (>= 3)
Version2.1
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("DiversitySampler")

Man pages

count: Counting Species Abundances
DiversitySampler-package: Re-Sampling to Estimate Diversity Indices
Gd: Genetic Evenness Index
Hs: Shannon's Diversity Index
H.sampler: Shannon's Diversity Re-sampler

Functions

DiversitySampler Man page
DiversitySampler-Package Man page
Gd Man page Source code
H.sampler Man page Source code
Hs Man page Source code
count Man page

Files

MD5
R
R/Hs.R
R/H.sampler.R
R/Gd.R
R/DiversitySampler-internal.R
R/count.R
NAMESPACE
man
man/Hs.Rd
man/H.sampler.Rd
man/Gd.Rd
man/DiversitySampler-package.Rd
man/count.Rd
DESCRIPTION
DiversitySampler documentation built on May 20, 2017, 2:05 a.m.