| OMEGA | R Documentation |
OMEGA() has been superseded by efa_reliability(), which is the recommended
interface going forward. It remains available and unchanged so existing code
keeps working.
This function finds omega total, hierarchical, and subscale, as well as additional
model-based indices of interpretive relevance (H index, ECV, PUC)
from a Schmid-Leiman (SL) solution or lavaan single factor, second-order (see below),
or bifactor solution. The SL-based omegas can either be found from a
psych::schmid(), efa_schmid_leiman(), or,
in a more flexible way, by leaving
model = NULL and specifying additional arguments. The type argument selects
how variables are assigned to group factors, and can reproduce the assignment
psych::omega() makes.
OMEGA(
model = NULL,
type = c("EFAtools", "psych"),
g_name = "g",
group_names = NULL,
add_ind = TRUE,
factor_corres = NULL,
var_names = NULL,
fac_names = NULL,
g_load = NULL,
s_load = NULL,
u2 = NULL,
cormat = NULL,
pattern = NULL,
Phi = NULL,
variance = c("correlation", "sums_load")
)
model |
class |
type |
character. Either |
g_name |
character. The name of the general factor from the lavaan solution.
This needs only be specified if |
group_names |
character. An optional vector of group names. The length
must correspond to the number of groups for which the |
add_ind |
logical. Whether additional indices (H index, ECV, PUC) should
be calculated or not (see details for these indices). If FALSE, only omegas
are returned. Default is |
factor_corres |
matrix. A logical matrix or a numeric matrix containing 0's and 1's that indicates which variable corresponds to which group factor. Must have the same dimensions as the matrix of group factor loadings from the SL solution. Cross-loadings are allowed here. See examples for use. |
var_names |
character. A vector with subtest names in the order
of the rows from the SL solution. This needs only be specified if |
fac_names |
character. An optional vector of group factor names in the
order of the columns of the SL solution. If left |
g_load |
numeric. A vector of general factor loadings from an SL solution.
This needs only be specified if |
s_load |
matrix. A matrix of group factor loadings from an SL solution.
This needs only be specified if |
u2 |
numeric. A vector of uniquenesses from an SL solution. This needs
only be specified if |
cormat |
matrix. A correlation matrix to be used when
|
pattern |
matrix. Pattern coefficients from an oblique factor solution.
This needs only be specified if |
Phi |
matrix. Factor intercorrelations from an oblique factor solution.
This needs only be specified if |
variance |
character. If |
All types of McDonald's omegas (total, hierarchical, and subscale; McDonald, 1978, 1985, 1999) are calculated for the general factor as well as for the subscales / group factors (see, e.g., Gignac, 2014; Rodriguez et al., 2016a, 2016b). Omegas refer to the correlation between a factor and a unit-weighted composite score and thus the true score variance in a unit-weighted composite based on the respective indicators. Omega total is the total true score variance in a composite. Omega hierarchical is the true score variance in a composite that is attributable to the general factor, and omega subscale is the true score variance in a composite attributable to all subscales / group factors (for the whole scale) or to the specific subscale / group factor (for subscale composites).
Accordingly, on a subscale row the hier column reports the share of that
subscale's composite variance due to the general factor and the sub column
the share due to the subscale-specific factor; the latter corresponds to the
omega hierarchical subscale of Rodriguez et al. (2016a, 2016b).
The H index (also construct reliability or replicability index) is the correlation between an optimally-weighted composite score and a factor (Hancock & Mueller, 2001; Rodriguez et al., 2016a, 2016b). It, too, can be calculated for the whole scale / general factor as well as for the subscales / group factors. Low values indicate that a latent variable is not well defined by its indicators.
The ECV (Rodriguez et al., 2016a, 2016b) is the ratio of the variance explained by the general factor and the variance explained by the general factor and the group factors.
The PUC (Bonifay et al., 2015; Reise et al., 2013, Rodriguez et al., 2016a, 2016b) refers to the proportion of correlations in the underlying correlation matrix that is not contaminated by variance of both the general factor and the group factors (i.e., correlations between indicators from different group factors, which reflect only general factor variance). The higher the PUC, the more similar a general factor from a multidimensional model will be to the single factor from a unidimensional model.
If model is a lavaan second-order or bifactor solution,
only the name of the general factor from the lavaan model needs to be specified
additionally with the g_name argument. It is then determined whether this
general factor is a second-order factor (second-order model with one second-order
factor assumed) or a breadth factor (bifactor model assumed). Please note that
this function only works for second-order models if they contain no more than
one second-order factor. In case of a second-order solution, a
Schmid-Leiman transformation is performed on the first- and second-order loadings
and omega coefficients are obtained from the transformed (orthogonalized) solution
(see efa_schmid_leiman() for more information on Schmid-Leiman transformation).
There is also the possibility to enter a lavaan single factor solution.
In this case, g_name is not needed. Finally, if a solution from a
lavaan multiple group analysis is entered, the indices are computed for
each group. For lavaan input the composite variances entering the omegas are
model-implied: they are computed from the fitted loadings and the fitted residual
covariance matrix, and count any freed residual covariance as well as the residual
variances. The coefficients thus coincide with the observed-score versions when the
model fits perfectly. The omegas split a composite's variance into a general part and one part
per group factor, which needs uncorrelated latent variables: fit a bifactor model
with orthogonal = TRUE (not lavaan's default) and leave the covariances between
a second-order model's first-order factors at zero. A fit whose factors correlate is
rejected rather than scored as though they did not.
The type argument is not evaluated if model is of class
lavaan.
If model is of class efa_schmid_leiman() or
psych::schmid() only the
type and, depending on the type (see below), the factor_corres
arguments need to be specified additionally. If model is of class
psych::schmid() and variance = "correlation"
(default), it is
recommended to also provide the original correlation matrix in cormat
to get more accurate results. Otherwise, the correlation matrix will be found
based on the pattern matrix and Phi from the
psych::schmid() output
using the psych::factor.model() function.
If model = NULL, the arguments type, factor_corres
(depending on the type, see below), var_names, g_load, s_load,
and u2 and either cormat (recommended) or Phi and
pattern need to be specified. If Phi and pattern are
specified instead of cormat, the correlation matrix is found using
the psych::factor.model() function.
The only difference between type = "EFAtools" and type = "psych"
is the determination of variable-to-factor correspondences. type = "psych"
derives them as psych::omega() does, by
taking the highest
group factor loading for each variable as the relevant group factor loading.
To do this, factor_corres must be left NULL.
Both settings score a composite by the true score variance the model attributes
to it, counting every factor its variables load on; they differ only in the
variance that is divided into. variance = "correlation" uses the composite's
observed variance, giving the observed-score form of omega; "sums_load" uses its
model-implied variance, which partitions exactly into omega hierarchical plus omega
subscale on the whole-scale row. The two settings agree up to model misfit, and
differ mainly in the whole-scale omega subscale, which counts all group-factor
variance under "sums_load" but only the assigned subscale composites under
"correlation".
If found for an SL or lavaan second-order or bifactor solution
without multiple groups:
A matrix with omegas for the whole scale and for the subscales and (only if
add_ind = TRUE) with the H index, ECV, and PUC.
tot |
Omega total. |
hier |
Omega hierarchical. |
sub |
Omega subscale. |
H |
H index. |
ECV |
Explained common variance. |
PUC |
Percent of uncontaminated correlations. |
If found for a lavaan single factor solution without multiple groups:
A (named) vector with omega total and (if add_ind = TRUE) the H index
for the single factor.
If found for a lavaan output from a multiple group analysis: A list
containing the output described above for each group.
McDonald, R. P. (1978). Generalizability in factorable domains: ‘‘Domain validity and generalizability’’. Educational and Psychological Measurement, 38, 75–79.
McDonald, R. P. (1985). Factor analysis and related methods. Hillsdale, NJ: Erlbaum.
McDonald, R. P. (1999). Test theory: A unified treatment. Mahwah, NJ: Erlbaum.
Rodriguez, A., Reise, S. P., & Haviland, M. G. (2016a). Applying bifactor statistical indices in the evaluation of psychological measures. Journal of Personality Assessment, 98, 223-237.
Rodriguez, A., Reise, S. P., & Haviland, M. G. (2016b). Evaluating bifactor models: Calculating and interpreting statistical indices. Psychological Methods, 21, 137-150.
Hancock, G. R., & Mueller, R. O. (2001). Rethinking construct reliability within latent variable systems. In R. Cudeck, S. du Toit, & D. Sörbom (Eds.), Structural equation modeling: Present and future—A Festschrift in honor of Karl Jöreskog (pp. 195–216). Lincolnwood, IL: Scientific Software International.
Reise, S. P., Scheines, R., Widaman, K. F., & Haviland, M. G. (2013). Multidimensionality and structural coefficient bias in structural equation modeling: A bifactor perspective. Educational and Psychological Measurement, 73, 5–26.
Bonifay, W. E., Reise, S. P., Scheines, R., & Meijer, R. R. (2015). When are multidimensional data unidimensional enough for structural equation modeling?: An evaluation of the DETECT multidimensionality index. Structural Equation Modeling, 22, 504—516.
Gignac, G. E. (2014). On the Inappropriateness of Using Items to Calculate Total Scale Score Reliability via Coefficient Alpha for Multidimensional Scales. European Journal of Psychological Assessment, 30, 130-139.
efa_reliability() for the same coefficients in a tidy, long-format
result.
## Use with lavaan outputs
if (requireNamespace("lavaan", quietly = TRUE)) {
# Create and fit bifactor model in lavaan (assume all variables have SDs of 1)
mod <- 'F1 =~ V1 + V2 + V3 + V4 + V5 + V6
F2 =~ V7 + V8 + V9 + V10 + V11 + V12
F3 =~ V13 + V14 + V15 + V16 + V17 + V18
g =~ V1 + V2 + V3 + V4 + V5 + V6 + V7 + V8 + V9 + V10 + V11 + V12 +
V13 + V14 + V15 + V16 + V17 + V18'
fit_bi <- lavaan::cfa(mod, sample.cov = test_models$baseline$cormat,
sample.nobs = 500, estimator = "ml", orthogonal = TRUE)
# Compute omegas and additional indices for bifactor solution
OMEGA(fit_bi, g_name = "g")
# Compute only omegas
OMEGA(fit_bi, g_name = "g", add_ind = FALSE)
# Create and fit second-order model in lavaan (assume all variables have SDs of 1)
mod <- 'F1 =~ V1 + V2 + V3 + V4 + V5 + V6
F2 =~ V7 + V8 + V9 + V10 + V11 + V12
F3 =~ V13 + V14 + V15 + V16 + V17 + V18
g =~ F1 + F2 + F3'
fit_ho <- lavaan::cfa(mod, sample.cov = test_models$baseline$cormat,
sample.nobs = 500, estimator = "ml")
# Compute omegas and additional indices for second-order solution
OMEGA(fit_ho, g_name = "g")
}
## Use with an output from the SL function, with type EFAtools
efa_mod <- efa_fit(test_models$baseline$cormat, N = 500, n_factors = 3,
estimator = "PAF", rotation = "promax")
sl_mod <- efa_schmid_leiman(efa_mod, estimator = "PAF")
# Indicator-to-factor correspondences from a salience threshold (here: .20):
factor_corres_1 <- sl_mod$sl[, c("F1", "F2", "F3")] >= .2
OMEGA(sl_mod, type = "EFAtools", factor_corres = factor_corres_1)
## Use with an output from the psych::schmid function, with type psych for
## OMEGA
schmid_mod <- psych::schmid(test_models$baseline$cormat, nfactors = 3,
n.obs = 500, fm = "pa", rotate = "Promax")
# Find correlation matrix from phi and pattern matrix from psych::schmid output
OMEGA(schmid_mod, type = "psych")
# Use specified correlation matrix
OMEGA(schmid_mod, type = "psych", cormat = test_models$baseline$cormat)
## Manually specify components (useful if omegas should be computed for a SL
## or bifactor solution found with another program)
## As an example, we extract the elements from an SL output here. This gives
## the same results as in the second example above.
factor_corres <- matrix(c(rep(0, 12), rep(1, 6), rep(0, 6), rep(1, 6),
rep(0, 6), rep(1, 6), rep(0, 12)), ncol = 3,
byrow = FALSE)
OMEGA(model = NULL, type = "EFAtools", var_names = rownames(sl_mod$sl),
g_load = sl_mod$sl[, "g"], s_load = sl_mod$sl[, c("F1", "F2", "F3")],
u2 = sl_mod$sl[, "u2"], cormat = test_models$baseline$cormat,
factor_corres = factor_corres)
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