netgen_v1: netgen_v1

In EcoNetGen: Simulate and Sample from Ecological Interaction Networks

netgen_v1

Description

netgen function

Usage

netgen_v1(n_modav = c(50, 10), cutoffs = c(3, 0), net_type = 1,
  net_degree = 10, net_rewire = c(0.3, 0), mod_probs = c(0.2, 0.2,
  0.2, 0.2, 0.2, 0, 0), verbose = FALSE)

Arguments

n_modav	network size and average module size (integer vector, length 2)
cutoffs	module and submodule minimum sizes (integer vector, length 2). (submodules are used only for bipartite and tripartite networks)
net_type	integer indicating type, see details
net_degree	average degree of connection
net_rewire	global and local network rewiring probabilities
mod_probs	module probabilities for types 1 to 51, used for constructing mixed networks, net_type = 0
verbose	logical, default TRUE. Should a message report summary statistics?

Details

network type

• 0 = mixed

• 1 = random

• 2 = scalefree

• 3 = nested

• 41 = bi-partite nested

• 42 = bi-partite random

• 51 = tri-trophic bipartite nested-random "ttbnr"

• 52 = tri-trophic bipartite nested-bipartite nested "ttbnbn"

Value

an igraph object

EcoNetGen documentation built on Aug. 27, 2023, 9:07 a.m.