ImpFeatures: Important Features

In EpiSemble: Ensemble Based Machine Learning Approach for Predicting Methylation States

Important Features

Description

Find out the most suitable features for predicting sequences with 6mA sites.

Usage

ImpFeatures(Fastafile,Species)

Arguments

Fastafile	Sequence file in .fasta format
Species	Model organism

Value

test_data_input: A matrix containing important features for prediction

References

Chen, W., Lv, H., Nie, F., & Lin, H. (2019). i6mA-Pred: identifying DNA N6-methyladenine sites in the rice genome. Bioinformatics, 35(16), 2796-2800.

Examples

library(EpiSemble)
data<-system.file("exdata/test.fasta", package = "EpiSemble")
imp<-ImpFeatures(Fastafile=data, Species="Rice")

EpiSemble documentation built on June 7, 2023, 5:16 p.m.