createCohorts: Construct cohorts

In Eunomia: A Standard Dataset in the OMOP Common Data Model

Description

Creates a set of predefined cohorts in a cohort table. WARNING: this will delete all existing cohorts in the table!

Usage

createCohorts(
  connectionDetails,
  cdmDatabaseSchema = "main",
  cohortDatabaseSchema = "main",
  cohortTable = "cohort"
)

Arguments

connectionDetails	The connection details to connect to the (Eunomia) database.
cdmDatabaseSchema	The name of the database schema holding the CDM data.
cohortDatabaseSchema	The name of the database schema where the cohorts will be written.
cohortTable	The name of the table in the cohortDatabaseSchema where the cohorts will be written.

Value

A data frame listing all created cohorts.

Examples

connectionDetails <- getEunomiaConnectionDetails()
createCohorts(connectionDetails)

connection <- connect(connectionDetails)

sql <- "SELECT COUNT(*)
FROM main.cohort
WHERE cohort_definition_id = 1;"

renderTranslateQuerySql(connection, sql)

disconnect(connection)

Eunomia documentation built on Nov. 8, 2020, 4:39 p.m.