FLASHMM: Fast and Scalable Single Cell Differential Expression Analysis using Mixed-Effects Models

A fast and scalable linear mixed-effects model (LMM) estimation algorithm for analysis of single-cell differential expression. The algorithm uses summary-level statistics and requires less computer memory to fit the LMM.

Package details

AuthorChangjiang Xu [aut, cre], Delaram Pouyabahar [ctb], Veronique Voisin [ctb], Gary Bader [ctb]
MaintainerChangjiang Xu <changjiang.xu@utoronto.ca>
LicenseMIT + file LICENSE
Version1.3.0
URL https://github.com/BaderLab/FLASHMM
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("FLASHMM")

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FLASHMM documentation built on April 8, 2026, 1:06 a.m.