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FSAtools: Fragment Analysis and Capillary Sequencing Tool Kit
A flexible and interfaced framework for importing, processing and ploting Applied Biosystems data files. Application to Reverse-Transcriptase Multiplex Ligation-dependent Probe Amplification (RT-MLPA) gene-expression profiling and classification is illustrated in Mareschal, Ruminy et al (2015) <doi:10.1016/j.jmoldx.2015.01.007>. Gene-fusion detection and Sanger sequencing are illustrated in Mareschal, Palau et al (2021) <doi:10.1182/bloodadvances.2020002517>. Examples are provided for genotyping applications as well.
Getting started
Browse package contents
Package details |
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| Author | Sylvain Mareschal [aut, cre], Philippe Ruminy [dtc, ctb], Jean R. Lobry [ctb], Fabrice Jardin [ths] |
| Maintainer | Sylvain Mareschal <mareschal@ovsa.fr> |
| License | GPL (>= 3) |
| Version | 2.0.5 |
| URL | https://bioinformatics.ovsa.fr/FSAtools |
| Package repository | View on CRAN |
| Installation |
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