FTICRMS: Programs for Analyzing Fourier Transform-Ion Cyclotron Resonance Mass Spectrometry Data

This package was developed partially with funding from the NIH Training Program in Biomolecular Technology (2-T32-GM08799).

Author
Don Barkauskas
Date of publication
2012-10-29 08:57:04
Maintainer
Don Barkauskas <barkda@wald.ucdavis.edu>
License
GPL-2
Version
0.8

View on CRAN

Man pages

baseline
Calculate Baselines for Spectroscopic Data
display.tests
Display Full Test Information for Peaks
extract.pars
Extract Parameters from File
FTICRMS-internal
Internal FTICRMS objects
FTICRMS-package
Fourier Transform-Ion Cyclotron Resonance Mass Spectrometry...
locate.peaks
Locate Peaks in a FT-ICR MS Spectrum
make.par.file
Create Parameter File for FT-ICR MS Analysis
run.all
Complete Analysis of FT-ICR MS Data
run.analysis
Test for Significant Peaks in FT-ICR MS by Controlling FDR
run.baselines
Calculate and Store Baselines for Spectroscopic Data
run.cluster.matrix
Identify Equivalent Peaks from Different Subjects
run.lrg.peaks
Extract "Large" Peaks from Files
run.peaks
Locate Potential Peaks in FT-ICR MS Spectra
run.strong.peaks
Locate Peaks that are "Large" in All Samples

Files in this package

FTICRMS
FTICRMS/NAMESPACE
FTICRMS/man
FTICRMS/man/run.all.Rd
FTICRMS/man/extract.pars.Rd
FTICRMS/man/run.strong.peaks.Rd
FTICRMS/man/baseline.Rd
FTICRMS/man/run.baselines.Rd
FTICRMS/man/locate.peaks.Rd
FTICRMS/man/FTICRMS-package.Rd
FTICRMS/man/display.tests.Rd
FTICRMS/man/run.lrg.peaks.Rd
FTICRMS/man/run.analysis.Rd
FTICRMS/man/run.cluster.matrix.Rd
FTICRMS/man/FTICRMS-internal.Rd
FTICRMS/man/make.par.file.Rd
FTICRMS/man/run.peaks.Rd
FTICRMS/DESCRIPTION
FTICRMS/MD5
FTICRMS/R
FTICRMS/R/run.peaks.R
FTICRMS/R/make.par.file.R
FTICRMS/R/display.tests.R
FTICRMS/R/run.strong.peaks.R
FTICRMS/R/extract.pars.R
FTICRMS/R/FTICRMS-internal.R
FTICRMS/R/run.cluster.matrix.R
FTICRMS/R/baseline.R
FTICRMS/R/run.analysis.R
FTICRMS/R/run.lrg.peaks.R
FTICRMS/R/run.all.R
FTICRMS/R/run.baselines.R
FTICRMS/R/locate.peaks.R