matrixL: Pathway structure matrix L
In FacPad: Bayesian Sparse Factor Analysis model for the inference of pathways responsive to drug treatment
Description
Usage
Format
Details
Examples
Description
A binary matrix of dimension G by K. Entries of 1 indicate
the presence of a probeset-pathway association relationship, whereas
entries of 0 indicate the opposite.
Usage
1
Format
The format is:
num [1:50, 1:5] 0 0 0 0 1 0 0 0 0 1 ...
Details
matrix L determines the sparsity strcuture of the loading matrix W.
The binary association information can be extracted from many pathway databases,
such as KEGG, BioCarta, etc.
Examples
1
FacPad documentation built on May 2, 2019, 3:46 p.m.
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Description Usage Format Details Examples
Description
A binary matrix of dimension G by K. Entries of 1 indicate the presence of a probeset-pathway association relationship, whereas entries of 0 indicate the opposite.
Usage
1 |
Format
The format is: num [1:50, 1:5] 0 0 0 0 1 0 0 0 0 1 ...
Details
matrix L determines the sparsity strcuture of the loading matrix W. The binary association information can be extracted from many pathway databases, such as KEGG, BioCarta, etc.
Examples
1 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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