FiRE: Finder of Rare Entities (FiRE)

The algorithm assigns rareness/ outlierness score to every sample in voluminous datasets. The algorithm makes multiple estimations of the proximity between a pair of samples, in low-dimensional spaces. To compute proximity, FiRE uses Sketching, a variant of locality sensitive hashing. For more details: Jindal, A., Gupta, P., Jayadeva and Sengupta, D., 2018. Discovery of rare cells from voluminous single cell expression data. Nature Communications, 9(1), p.4719. <doi:10.1038/s41467-018-07234-6>.

Package details

AuthorPrashant Gupta [aut, cre], Aashi Jindal [aut], Jayadeva [aut], Debarka Sengupta [aut]
MaintainerPrashant Gupta <[email protected]>
LicenseGPL-3
Version1.0
URL https://github.com/princethewinner/FiRE
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("FiRE")

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FiRE documentation built on May 2, 2019, 9:46 a.m.