moving_window: Summarize data within windows of time

In GCalcium: A Data Manipulation and Analysis Package for Calcium Indicator Data

Description

'moving_window' summarizes data within windows of a certain length.

Usage

moving_window(Dataframe, Trial, Window.length, FUN = mean)

Arguments

Dataframe	a GCalcium-format data frame or matrix
Trial	a single trial number
Window.length	length of time each window encompasses
FUN	a function to apply to each window

Value

a data frame with start and stop times of each window, the chronological number of each window, and summarized values

Examples

### Format data frame
df.new <- format_data(GCaMP)

### In trial 5, how does the average fluorescence change in 1 second time frames?
moving_window(Dataframe = df.new, Trial = 5, Window.length = 1, FUN = mean)

GCalcium documentation built on May 2, 2019, 9:31 a.m.