GGMselect: Gaussian Graphs Models Selection

Graph estimation in Gaussian Graphical Models. The main functions return the adjacency matrix of an undirected graph estimated from a data matrix.

Author
Annie Bouvier, Christophe Giraud, Sylvie Huet, Verzelen N.
Date of publication
2016-11-23 14:09:39
Maintainer
Annie Bouvier <Annie.Bouvier@inra.fr>
License
GPL (>= 3)
Version
0.1-11
URLs

View on CRAN

Man pages

convertGraph
Convert graphs into adjacency matrices
GGMselect-package
Gaussian Graphs Models selection
penalty
Penalty function
selectFast
Estimate a graph in a Gaussian Graphical Model: Fast...
selectMyFam
Select a graph within a given family of graphs in Gaussian...
selectQE
Estimate a graph in a Gaussian Graphical Model: Quasi...
simulateGraph
Generate sparse Gaussian Graphical Models

Files in this package

GGMselect
GGMselect/inst
GGMselect/inst/CITATION
GGMselect/inst/extdata
GGMselect/inst/extdata/G3simone.Rdata
GGMselect/inst/extdata/genes.lm.Rdata
GGMselect/inst/doc
GGMselect/inst/doc/Notice.pdf
GGMselect/inst/doc/Notice.R
GGMselect/inst/doc/Notice.Rnw
GGMselect/tests
GGMselect/tests/test3Fast.R
GGMselect/tests/test7Fast.Rout.save
GGMselect/tests/test1QE.R
GGMselect/tests/testMyFam.R
GGMselect/tests/test1Fast.R
GGMselect/tests/test1QE.Rout.save
GGMselect/tests/test5Fast.R
GGMselect/tests/shPUR.Rout.save
GGMselect/tests/test1Fast.Rout.save
GGMselect/tests/shPUR.R
GGMselect/tests/test3QE.Rout.save
GGMselect/tests/execution
GGMselect/tests/sh9.2012.R
GGMselect/tests/test7Fast.R
GGMselect/tests/penInf.R
GGMselect/tests/test3Fast.Rout.save
GGMselect/tests/bsch.Rout.save
GGMselect/tests/penInf.Rout.save
GGMselect/tests/testMyFam.Rout.save
GGMselect/tests/test3QE.R
GGMselect/tests/test2Fast.Rout.save
GGMselect/tests/test2Fast.R
GGMselect/tests/test5Fast.Rout.save
GGMselect/tests/bsch.R
GGMselect/tests/test2QE.R
GGMselect/tests/sh9.2012.Rout.save
GGMselect/tests/test2QE.Rout.save
GGMselect/src
GGMselect/src/Makevars
GGMselect/src/boucle.f
GGMselect/src/loop.c
GGMselect/src/scr.c
GGMselect/src/QESW.c
GGMselect/src/critQE.c
GGMselect/NAMESPACE
GGMselect/demo
GGMselect/demo/simulateGraph.R
GGMselect/demo/selectFast.R
GGMselect/demo/selectQE.R
GGMselect/demo/selectMyFam.R
GGMselect/demo/00Index
GGMselect/demo/convertGraph.R
GGMselect/demo/penalty.R
GGMselect/NEWS
GGMselect/R
GGMselect/R/simulateGraph.R
GGMselect/R/ModLasso.R
GGMselect/R/MyFamily.R
GGMselect/R/EW.R
GGMselect/R/GGMselect.R
GGMselect/R/convertGraph.R
GGMselect/R/QE.R
GGMselect/R/penalty.R
GGMselect/R/C01.R
GGMselect/R/zzz.R
GGMselect/vignettes
GGMselect/vignettes/imsart.sty
GGMselect/vignettes/estimation.bib
GGMselect/vignettes/Notice.Rnw
GGMselect/vignettes/imsart.cls
GGMselect/MD5
GGMselect/build
GGMselect/build/vignette.rds
GGMselect/DESCRIPTION
GGMselect/man
GGMselect/man/GGMselect-package.Rd
GGMselect/man/selectFast.Rd
GGMselect/man/selectQE.Rd
GGMselect/man/penalty.Rd
GGMselect/man/simulateGraph.Rd
GGMselect/man/convertGraph.Rd
GGMselect/man/selectMyFam.Rd