simdata: An example dataset to demonstrate the usage of GLIDE

In GLIDE: Global and Individual Tests for Direct Effects

An example dataset to demonstrate the usage of GLIDE

Description

An example simulation dataset used to demonstrate the usage of GLIDE. It is a list composed of a dataframe "simdat" and a dataframe "coeff"

Usage

data("simdata")

Format

coeff is a one-column dataframe. It consists of exposure coefficients of genotypes of 75 SNPs. simdat is a data frame consisting of 20000 observations. It has 81 columns, with 75 columns for genotypes of 75 SNPs and 6 columns of following covariates:

age

an integer vector to indicate age

sex

a factor vector to indicate gender

pc1

a numeric vector of the first principal component of genotypes

pc2

a numeric vector of the second principal component of genotypes

pc3

a numeric vector of the third principal component of genotypes

outcome

a factor vector to indicate the outcome, 1/0

Examples

  data("simdata")
  ls()

GLIDE documentation built on May 28, 2022, 1:08 a.m.