A_thaliana: A thaliana functional enrichment analysis of 2224 ortholog...

In GOCompare: Comprehensive GO Terms Comparison Between Species

A thaliana functional enrichment analysis of 2224 ortholog genes related to cancer-hallmarks

Description

This dataset is the original dataset obtained for Clavijo-Buriticá (In preparation)

Usage

A_thaliana

Format

A data frame with 4063 rows and 6 variables:

Enrichment_FDR

Numeric: False discovery rate values for the GO term

Genes_in_list

numeric: Number of genes in the list of genes for a given GO term

Total_genes

numeric: Number of genes in the genome of a species for a given GO term

Functional_Category

character: GO term name or GO term id

Genes

character: Genes found fot a given GO term

feature

character: A column representing the belonging of a group of comparison

Source

https://data.mendeley.com/datasets/myyy2wxd59/1

References

Clavijo-Buriticá, Sosa, C.C., Mosquera, A.J. Álvarez, A., Medina, J. Quimbaya, M.A. A systematic comparison of the molecular machinery associated with Cancer-Hallmarks between plants and humans reveals Arabidopsis thaliana as a useful model to understand specific carcinogenic events (to be submitted, Target journal: Plos Biology)

GOCompare documentation built on Dec. 10, 2022, 1:08 a.m.