Files in GRIN2

Genomic Random Interval (GRIN)

R/find.gene.lsn.overlaps.R R/grin.oncoprint.mtx.R R/grin.barplt.R R/prob.hits.R R/get.chrom.length.R R/alex.waterfall.plot.R R/lesion.data.R R/KW.hit.express.R R/dist.lsn.R R/genomewide.log10q.plot.R R/get.ensembl.annotation.R R/stat.by.group.R R/alex.boxplots.R R/order.index.lsn.data.R R/oncoprint.legend.R R/alex.waterfall.prep.R R/alex.prep.lsn.expr.R R/grin.lsn.boundaries.R R/hg19.gene.annotation.R R/hg19_cytoband.R R/p.order.R R/grin.assoc.lsn.outcome.R R/row.bern.conv.R R/onco.print.alter.func.R R/row.stats.by.group.R R/pc06.fdr.R R/prep.binary.lsn.mtx.R R/genomewide.lsn.plot.R R/compute.gw.coordinates.R R/row.prob.subj.hit.R R/default.grin.colors.R R/pathways.R R/top.alex.waterfall.plots.R R/prep.gene.lsn.data.R R/lsn.transcripts.plot.R R/define.grps.R R/alex.pathway.R R/hg38_cytoband.R R/order.index.gene.data.R R/hg19.chrom.size.R R/expr.data.R R/write.grin.xlsx.R R/one.KW.pvalue.R R/grin.stats.lsn.plot.R R/onco.print.props.R R/grin.stats.R R/clin.data.R R/prep.lsn.type.matrix.R R/count.hits.R inst/doc/GRIN2.R inst/doc/GRIN2.Rmd vignettes/GRIN2.Rmd man/order.index.lsn.data.Rd man/onco.print.props.Rd man/grin.assoc.lsn.outcome.Rd man/hg19.gene.annotation.Rd man/prob.hits.Rd man/get.chrom.length.Rd man/grin.stats.lsn.plot.Rd man/alex.prep.lsn.expr.Rd man/pathways.Rd man/lsn.transcripts.plot.Rd man/count.hits.Rd man/expr.data.Rd man/clin.data.Rd man/lesion.data.Rd man/grin.oncoprint.mtx.Rd man/prep.binary.lsn.mtx.Rd man/prep.gene.lsn.data.Rd man/alex.pathway.Rd man/default.grin.colors.Rd man/grin.lsn.boundaries.Rd man/alex.waterfall.plot.Rd man/alex.boxplots.Rd man/grin.barplt.Rd man/write.grin.xlsx.Rd man/order.index.gene.data.Rd man/top.alex.waterfall.plots.Rd man/hg19_cytoband.Rd man/grin.stats.Rd man/compute.gw.coordinates.Rd man/KW.hit.express.Rd man/get.ensembl.annotation.Rd man/alex.waterfall.prep.Rd man/hg38_cytoband.Rd man/find.gene.lsn.overlaps.Rd man/hg19.chrom.size.Rd man/genomewide.lsn.plot.Rd man/prep.lsn.type.matrix.Rd man/genomewide.log10q.plot.Rd