Implementation of Sampling Formulas for the Unified Neutral Model of Biodiversity and Biogeography, with or without Guild Structure

expected.SAD | Calculate the expected species abundance distribution of the... |

expected.SAD.Guilds | Estimate the expected species abundance distribution of both... |

expected.SAD.Guilds.Conditional | Estimate the expected species abundance distribution of both... |

generate.ESF | Generate community data under the standard neutral model of... |

generate.Guilds | Generate Artificial data under the GUILDS model |

generate.Guilds.Cond | Generate Artificial data under the GUILDS model, conditioned... |

GUILDS-internal | Internal Guilds functions |

GUILDS-package | Package implementing the Guilds sampling formula for the... |

logLikelihood.ESF | Likelihood of the Etienne sampling formula |

logLikelihood.Guilds | Likelihood of the Guilds sampling formula |

logLikelihood.Guilds.Conditional | Likelihood of the Guilds sampling formula, conditional on... |

maxLikelihood.ESF | Maximization of the loglikelihood given the standard Neutral... |

maxLikelihood.Guilds | Maximization of the loglikelihood under the Guilds Model. |

maxLikelihood.Guilds.Conditional | Maximization of the loglikelihood under the Guilds Model,... |

preston_plot | Barplot in Preston style of an abundance dataset |

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