GeNetIt: Spatial Graph-Theoretic Genetic Gravity Modelling
Version 0.1-0

Implementation of spatial graph-theoretic genetic gravity models. The model framework is applicable for other types of spatial flow questions. Includes functions for constructing spatial graphs, sampling and summarizing associated raster variables and building unconstrained and singly constrained gravity models.

AuthorJeffrey S. Evans [aut, cre], Melanie Murphy [aut]
Date of publication2016-03-10 00:27:49
MaintainerJeffrey S. Evans <jeffrey_evans@tnc.org>
LicenseGPL-3
Version0.1-0
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("GeNetIt")

Popular man pages

build.node.data: Build node data
dmatrix.df: Distance matrix to data.frame
dps: dps genetic distance matrix for Columbia spotted frog (Rana...
gravity: Gravity model
plot.gravity: Plot gravity model
rasters: Subset of raster data for Columbia spotted frog (Rana...
summary.gravity: Summarizing Gravity Model Fits
See all...

All man pages Function index File listing

Man pages

area.graph.statistics: Statistics for edges (lines) based on a defined scale (area).
build.node.data: Build node data
dmatrix.df: Distance matrix to data.frame
dps: dps genetic distance matrix for Columbia spotted frog (Rana...
graph.statistics: Point sample and statistics for edges (lines)
gravity: Gravity model
knn.graph: Saturated or K Nearest Neighbour Graph
plot.gravity: Plot gravity model
predict.gravity: Predict gravity model
print.gravity: Print gravity model
ralu.model: Columbia spotted frog (Rana luteiventris) data for specifying...
ralu.site: Subset of site-level spatial point data for Columbia spotted...
rasters: Subset of raster data for Columbia spotted frog (Rana...
summary.gravity: Summarizing Gravity Model Fits

Functions

area.graph.statistics Man page Source code
build.node.data Man page Source code
dmatrix.df Man page Source code
dps Man page
graph.statistics Man page Source code
gravity Man page Source code
knn.graph Man page Source code
plot.gravity Man page Source code
predict.gravity Man page Source code
print.gravity Man page
ralu.model Man page
ralu.site Man page
rasters Man page
summary.gravity Man page Source code

Files

inst
inst/CITATION
inst/NEWS
NAMESPACE
data
data/dps.rda
data/rasters.rda
data/datalist
data/ralu.site.rda
data/ralu.model.rda
R
R/predict.gravity.R
R/ralu.site-data.R
R/summary.gravity.R
R/build.node.data.R
R/dmatrix.df.R
R/print.gravity.R
R/graph.statistics.R
R/rasters-data.R
R/area.graph.statistics.R
R/dps-data.R
R/ralu.model-data.R
R/knn.graph.R
R/gravity.R
R/plot.gravity.R
MD5
DESCRIPTION
man
man/gravity.Rd
man/build.node.data.Rd
man/print.gravity.Rd
man/plot.gravity.Rd
man/area.graph.statistics.Rd
man/graph.statistics.Rd
man/predict.gravity.Rd
man/ralu.site.Rd
man/dps.Rd
man/summary.gravity.Rd
man/ralu.model.Rd
man/knn.graph.Rd
man/rasters.Rd
man/dmatrix.df.Rd
GeNetIt documentation built on May 19, 2017, 9:58 p.m.

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