GeNetIt: Spatial Graph-Theoretic Genetic Gravity Modelling

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Implementation of spatial graph-theoretic genetic gravity models. The model framework is applicable for other types of spatial flow questions. Includes functions for constructing spatial graphs, sampling and summarizing associated raster variables and building unconstrained and singly constrained gravity models.

Author
Jeffrey S. Evans [aut, cre], Melanie Murphy [aut]
Date of publication
2016-03-10 00:27:49
Maintainer
Jeffrey S. Evans <jeffrey_evans@tnc.org>
License
GPL-3
Version
0.1-0

View on CRAN

Man pages

area.graph.statistics
Statistics for edges (lines) based on a defined scale (area).
build.node.data
Build node data
dmatrix.df
Distance matrix to data.frame
dps
dps genetic distance matrix for Columbia spotted frog (Rana...
graph.statistics
Point sample and statistics for edges (lines)
gravity
Gravity model
knn.graph
Saturated or K Nearest Neighbour Graph
plot.gravity
Plot gravity model
predict.gravity
Predict gravity model
print.gravity
Print gravity model
ralu.model
Columbia spotted frog (Rana luteiventris) data for specifying...
ralu.site
Subset of site-level spatial point data for Columbia spotted...
rasters
Subset of raster data for Columbia spotted frog (Rana...
summary.gravity
Summarizing Gravity Model Fits

Files in this package

GeNetIt
GeNetIt/inst
GeNetIt/inst/CITATION
GeNetIt/inst/NEWS
GeNetIt/NAMESPACE
GeNetIt/data
GeNetIt/data/dps.rda
GeNetIt/data/rasters.rda
GeNetIt/data/datalist
GeNetIt/data/ralu.site.rda
GeNetIt/data/ralu.model.rda
GeNetIt/R
GeNetIt/R/predict.gravity.R
GeNetIt/R/ralu.site-data.R
GeNetIt/R/summary.gravity.R
GeNetIt/R/build.node.data.R
GeNetIt/R/dmatrix.df.R
GeNetIt/R/print.gravity.R
GeNetIt/R/graph.statistics.R
GeNetIt/R/rasters-data.R
GeNetIt/R/area.graph.statistics.R
GeNetIt/R/dps-data.R
GeNetIt/R/ralu.model-data.R
GeNetIt/R/knn.graph.R
GeNetIt/R/gravity.R
GeNetIt/R/plot.gravity.R
GeNetIt/MD5
GeNetIt/DESCRIPTION
GeNetIt/man
GeNetIt/man/gravity.Rd
GeNetIt/man/build.node.data.Rd
GeNetIt/man/print.gravity.Rd
GeNetIt/man/plot.gravity.Rd
GeNetIt/man/area.graph.statistics.Rd
GeNetIt/man/graph.statistics.Rd
GeNetIt/man/predict.gravity.Rd
GeNetIt/man/ralu.site.Rd
GeNetIt/man/dps.Rd
GeNetIt/man/summary.gravity.Rd
GeNetIt/man/ralu.model.Rd
GeNetIt/man/knn.graph.Rd
GeNetIt/man/rasters.Rd
GeNetIt/man/dmatrix.df.Rd