Phylotree-class: S4 class to represent phylogenetic trees.
In GeRnika: Simulation, Visualization and Comparison of Tumor Evolution Data
Phylotree-class R Documentation
S4 class to represent phylogenetic trees.
Description
S4 class to represent phylogenetic trees.
Slots
BA data.frame containing the square matrix that represents the ancestral relations among the clones of the phylogenetic tree.
clonesA vector representing the equivalence table of the clones in the phylogenetic tree.
genesA vector representing the equivalence table of the genes in the phylogenetic tree.
parentsA vector representing the parents of the clones in the phylogenetic tree.
treeA Node class object representing the phylogenetic tree.
labelsA vector representing the tags of the genes in the phylogenetic tree.
GeRnika documentation built on April 3, 2025, 7:48 p.m.
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| Phylotree-class | R Documentation |
S4 class to represent phylogenetic trees.
Description
S4 class to represent phylogenetic trees.
Slots
BA data.frame containing the square matrix that represents the ancestral relations among the clones of the phylogenetic tree.
clonesA vector representing the equivalence table of the clones in the phylogenetic tree.
genesA vector representing the equivalence table of the genes in the phylogenetic tree.
parentsA vector representing the parents of the clones in the phylogenetic tree.
treeA
Nodeclass object representing the phylogenetic tree.labelsA vector representing the tags of the genes in the phylogenetic tree.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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