| calculateAlleleFreqs | Calculate Allele Frequencies from Genotype Matrix |
| Dxy | Dxy |
| FixedSites | FixedSites |
| Fst | Fst |
| GenoPop_Impute | GenoPop-Impute |
| Heterozygosity | Heterozygosity Rate |
| OneDimSFS | OneDimSFS |
| Pi | Pi |
| PrivateAlleles | PrivateAlleles |
| SegregatingSites | SegregatingSites |
| separateByPopulations | Separate Genotype Matrix by Populations |
| SingletonSites | SingletonSites |
| TajimasD | TajimasD |
| TwoDimSFS | TwoDimSFS |
| WattersonsTheta | WattersonsTheta |
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