GenoTriplo: Genotyping Triploids (or Diploids) from Luminescence Data

Genotyping of triploid individuals from luminescence data (marker probeset A and B). Works also for diploids. Two main functions: Run_Clustering() that regroups individuals with a same genotype based on proximity and Run_Genotyping() that assigns a genotype to each cluster. For Shiny interface use: launch_GenoShiny().

Getting started

Package details

AuthorJulien Roche [aut, cre], Florence Phocas [aut], Mathieu Besson [aut], Pierre Patrice [aut], Marc Vandeputte [aut], François Allal [aut], Pierrick Haffray [aut]
MaintainerJulien Roche <jjm.roche@gmail.com>
LicenseGPL
Version1.0.4
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("GenoTriplo")

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GenoTriplo documentation built on May 29, 2024, 11:22 a.m.