GrammR: Graphical Representation and Modeling of Metagenomic Reads
Version 1.1.0

Represents metagenomic samples on the Euclidean space to examine similarity amongst samples by studying clusters in the model. Given the matrix of metagenomic counts for samples, this package (1) quantifies dissimilarity between samples using Kendall's tau-distance, (2) constructs multidimensional models of different dimension, and (3) plots the models for visualization and comparison.

Package details

AuthorDeepak Nag Ayyala [aut, cre], Shili Lin [aut]
Date of publication2016-02-14 17:56:46
MaintainerDeepak Nag Ayyala <deepaknagayyala@gmail.com>
LicenseLGPL-3
Version1.1.0
URL https://www.r-project.org http://www.stat.osu.edu/~statgen/SOFTWARE/GrammR/
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("GrammR")

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GrammR documentation built on May 29, 2017, 11:38 a.m.