HHG: Heller-Heller-Gorfine Tests of Independence and Equality of Distributions
Version 2.0

Heller-Heller-Gorfine ('HHG') tests are a set of powerful statistical tests of multivariate k-sample homogeneity and independence. For the univariate case, the package also offers implementations of the 'MinP DDP' and 'MinP ADP' tests, which are consistent against all continuous alternatives but are distribution-free, and are thus much faster to apply.

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AuthorBarak Brill & Shachar Kaufman, based in part on an earlier implementation by Ruth Heller and Yair Heller.
Date of publication2016-10-27 00:26:24
MaintainerBarak Brill <barakbri@mail.tau.ac.il>
LicenseGPL-2
Version2.0
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("HHG")

Man pages

Fast.independence.test: Atoms based distribution-free test of independence
Fast.independence.test.nulltable: Null tables for the atoms based distribution-free test of...
hhg.example.datagen: A set of example data generators used to demonstrate the HHG...
HHG-package: Heller-Heller-Gorfine (HHG) Tests of Independence and...
hhg.test: Heller-Heller-Gorfine Tests of Independence and Equality of...
hhg.univariate.ind.combined.test: Distribution-free test of independence
hhg.univariate.ind.nulltable: Null tables for the distribution-free test of independence
hhg.univariate.ind.pvalue: The p-value computation for the test of independence using a...
hhg.univariate.ind.stat: The independence test statistics for all partition sizes
hhg.univariate.ks.combined.test: Distribution-free K-sample tests
hhg.univariate.ks.nulltable: The K-sample test null tables for all partition sizes
hhg.univariate.ks.pvalue: The p-value computation for the K-sample problem using a...
hhg.univariate.ks.stat: The K-sample test statistics for all partition sizes
hhg.univariate.nulltable.from.mstats: Constructor of Distribution Free Null Table Using Existing...
nr_bins_equipartition: Function for selecting the default number of atoms for...
print.HHG.Test.Result: Print function for result of HHG tests
print.UnivariateObject: Print function for Univariate Null Table Object
print.UnivariateStatistic: Print function for Univariate Statistic Test Object
Yeast_hughes: Yeast gene expression data

Functions

Fast.independence.test Man page Source code
Fast.independence.test.nulltable Man page Source code
HHG Man page
HHG-package Man page
UnivariateObject.findpval Source code
Yeast_hughes Man page
check_compress_args Source code
configure.wald.sequential Source code
datagen2Parabolas Source code
datagen4indclouds Source code
datagenCircle Source code
datagenDiamond Source code
datagenFourClassUniv Source code
datagenParabola Source code
datagenTwoClassMultiv Source code
datagenTwoClassUniv Source code
datagenW Source code
hhg.ddp2.inversions Source code
hhg.example.datagen Man page Source code
hhg.hoeffding.inversions Source code
hhg.test Man page Source code
hhg.test.2.sample Man page Source code
hhg.test.adp_mk Source code
hhg.test.k.sample Man page Source code
hhg.test.udfree Source code
hhg.univariate.check.inputs Source code
hhg.univariate.compute.from.mstats Source code
hhg.univariate.ind.combined.test Man page Source code
hhg.univariate.ind.nulltable Man page Source code
hhg.univariate.ind.pvalue Man page Source code
hhg.univariate.ind.stat Man page Source code
hhg.univariate.ks.combined.test Man page Source code
hhg.univariate.ks.nulltable Man page Source code
hhg.univariate.ks.pvalue Man page Source code
hhg.univariate.ks.stat Man page Source code
hhg.univariate.ks.stat.max Source code
hhg.univariate.nulltable.from.mstats Man page Source code
hhg.univariate.object.constructor.from.mstats Source code
hhg.univariate.object.fast.compute.statistic Source code
lean_null_constructor Source code
lean_null_p.val Source code
ml_by_variant Source code
ml_index_to_chosen Source code
ml_index_to_chosen_vector Source code
nr_bins_equipartition Man page Source code
onAttach Source code
organize.results Source code
print.HHG.Test.Result Man page Source code
print.UnivariateObject Man page Source code
print.UnivariateStatistic Man page Source code
print.ind.combined Source code
print.ind.stat Source code
print.ks.combined Source code
print.ks.stat Source code
print.ml.pretty Source code
xdp.ks.competitors Source code Source code
xdp.test.k.sample Source code
xdp.test.k.sample.mk Source code

Files

inst
inst/doc
inst/doc/HHG.Rmd
inst/doc/HHG.R
inst/doc/HHG.html
configure.ac
src
src/StatsComputer.cpp
src/HHG.h
src/SequentialTest.h
src/HHG.cpp
src/Makevars.in
src/Makevars.win
src/StatsComputer.h
src/SequentialTest.cpp
NAMESPACE
data
data/Yeast_hughes.RData
R
R/HHG_extras.R
R/HHG_univariate.R
R/HHG_additional_univariate.R
R/HHG.R
R/HHG_utils.R
vignettes
vignettes/HHG_table.GIF
vignettes/DDP_partitions.gif
vignettes/HHG.Rmd
vignettes/HHG_Spheres.PNG
vignettes/style.css
MD5
build
build/vignette.rds
DESCRIPTION
man
man/print.HHG.Test.Result.Rd
man/Fast.independence.test.nulltable.Rd
man/hhg.example.datagen.Rd
man/hhg.univariate.ind.combined.test.Rd
man/hhg.univariate.nulltable.from.mstats.Rd
man/hhg.univariate.ind.nulltable.Rd
man/HHG-package.Rd
man/hhg.univariate.ks.stat.Rd
man/hhg.univariate.ks.nulltable.Rd
man/Yeast_hughes.Rd
man/print.UnivariateStatistic.Rd
man/hhg.univariate.ind.pvalue.Rd
man/print.UnivariateObject.Rd
man/hhg.test.Rd
man/hhg.univariate.ks.pvalue.Rd
man/hhg.univariate.ks.combined.test.Rd
man/Fast.independence.test.Rd
man/nr_bins_equipartition.Rd
man/hhg.univariate.ind.stat.Rd
HHG documentation built on May 19, 2017, 10:47 p.m.