HHG: Heller-Heller-Gorfine Tests of Independence and Equality of Distributions

Heller-Heller-Gorfine ('HHG') tests are a set of powerful statistical tests of multivariate k-sample homogeneity and independence. For the univariate case, the package also offers implementations of the 'MinP DDP' and 'MinP ADP' tests, which are consistent against all continuous alternatives but are distribution-free, and are thus much faster to apply.

Author
Barak Brill & Shachar Kaufman, based in part on an earlier implementation by Ruth Heller and Yair Heller.
Date of publication
2016-10-27 00:26:24
Maintainer
Barak Brill <barakbri@mail.tau.ac.il>
License
GPL-2
Version
2.0

View on CRAN

Man pages

Fast.independence.test
Atoms based distribution-free test of independence
Fast.independence.test.nulltable
Null tables for the atoms based distribution-free test of...
hhg.example.datagen
A set of example data generators used to demonstrate the HHG...
HHG-package
Heller-Heller-Gorfine (HHG) Tests of Independence and...
hhg.test
Heller-Heller-Gorfine Tests of Independence and Equality of...
hhg.univariate.ind.combined.test
Distribution-free test of independence
hhg.univariate.ind.nulltable
Null tables for the distribution-free test of independence
hhg.univariate.ind.pvalue
The p-value computation for the test of independence using a...
hhg.univariate.ind.stat
The independence test statistics for all partition sizes
hhg.univariate.ks.combined.test
Distribution-free K-sample tests
hhg.univariate.ks.nulltable
The K-sample test null tables for all partition sizes
hhg.univariate.ks.pvalue
The p-value computation for the K-sample problem using a...
hhg.univariate.ks.stat
The K-sample test statistics for all partition sizes
hhg.univariate.nulltable.from.mstats
Constructor of Distribution Free Null Table Using Existing...
nr_bins_equipartition
Function for selecting the default number of atoms for...
print.HHG.Test.Result
Print function for result of HHG tests
print.UnivariateObject
Print function for Univariate Null Table Object
print.UnivariateStatistic
Print function for Univariate Statistic Test Object
Yeast_hughes
Yeast gene expression data

Files in this package

HHG
HHG/inst
HHG/inst/doc
HHG/inst/doc/HHG.Rmd
HHG/inst/doc/HHG.R
HHG/inst/doc/HHG.html
HHG/configure.ac
HHG/src
HHG/src/StatsComputer.cpp
HHG/src/HHG.h
HHG/src/SequentialTest.h
HHG/src/HHG.cpp
HHG/src/Makevars.in
HHG/src/Makevars.win
HHG/src/StatsComputer.h
HHG/src/SequentialTest.cpp
HHG/NAMESPACE
HHG/data
HHG/data/Yeast_hughes.RData
HHG/R
HHG/R/HHG_extras.R
HHG/R/HHG_univariate.R
HHG/R/HHG_additional_univariate.R
HHG/R/HHG.R
HHG/R/HHG_utils.R
HHG/vignettes
HHG/vignettes/HHG_table.GIF
HHG/vignettes/DDP_partitions.gif
HHG/vignettes/HHG.Rmd
HHG/vignettes/HHG_Spheres.PNG
HHG/vignettes/style.css
HHG/MD5
HHG/build
HHG/build/vignette.rds
HHG/DESCRIPTION
HHG/man
HHG/man/print.HHG.Test.Result.Rd
HHG/man/Fast.independence.test.nulltable.Rd
HHG/man/hhg.example.datagen.Rd
HHG/man/hhg.univariate.ind.combined.test.Rd
HHG/man/hhg.univariate.nulltable.from.mstats.Rd
HHG/man/hhg.univariate.ind.nulltable.Rd
HHG/man/HHG-package.Rd
HHG/man/hhg.univariate.ks.stat.Rd
HHG/man/hhg.univariate.ks.nulltable.Rd
HHG/man/Yeast_hughes.Rd
HHG/man/print.UnivariateStatistic.Rd
HHG/man/hhg.univariate.ind.pvalue.Rd
HHG/man/print.UnivariateObject.Rd
HHG/man/hhg.test.Rd
HHG/man/hhg.univariate.ks.pvalue.Rd
HHG/man/hhg.univariate.ks.combined.test.Rd
HHG/man/Fast.independence.test.Rd
HHG/man/nr_bins_equipartition.Rd
HHG/man/hhg.univariate.ind.stat.Rd