hyperlinks: hyperlinks

In HTGM: High Throughput 'GoMiner'

hyperlinks

Description

driver to add gene list hyperlinks to the HTGM heatmap

Usage

hyperlinks(s, rownames, colnames)

Arguments

s	character path name of the file containing the HTGM svg
rownames	character vector of row names
colnames	character vector of column names

Value

returns the path name of the file containing the hyperlinked HTGM svg

Examples

#load("data/x_rn.RData")
#load("data/x_cn.RData")
#load("data/x_svg.RData")
s<-system.file("extdata","x_htgm.svg",package="HTGM")
# need to avoid writing to "extdata"
dir<-tempdir()
file.copy(from=s, to=dir)
hyperlinkedFileName<-hyperlinks(sprintf("%s/%s",dir,"x_htgm.svg"),x_rn,x_cn)
print("hyperlinkedFileName")
print(hyperlinkedFileName)

HTGM documentation built on April 12, 2025, 1:30 a.m.