HW.pval calculates plain and fully conditional root-mean-square, chi-square, and log likelihood-ratio P-values for the user-provided genotypic counts to be consistent with the Hardy-Weinberg equilibrium model. For further information on the Hardy-Weinberg equilibrium model and the pseudocode, refer to the paper "Testing Hardy-Weinberg equilibrium with a simple root-mean-square statistic" by Rachel Ward.

Author | Shubhodeep Mukherji <deep.mukherji@utexas.edu> |

Date of publication | 2012-07-11 12:43:08 |

Maintainer | Shubhodeep Mukherji <deep.mukherji@utexas.edu> |

License | GPL-3 |

Version | 1.0 |

**create.model:** Creating the Hardy-Weinberg model distribution from a given...

**HW.cond:** Computing the fully conditional P-value for a given...

**HW.plain:** Computing the plain P-Value for a given lower-triangular...

**HW.pval:** Testing Hardy-Weinberg Equilibrium for Multiallelic Genes

**HW.pval-package:** Testing Hardy-Weinberg Equilibrium for Multiallelic Genes

**test.chisq:** Computing the chi-square test statistic

**test.gsq:** Computing the log likelihood-ratio test statistic

**test.rms:** Computing the root-mean-square test statistic

HW.pval

HW.pval/MD5

HW.pval/R

HW.pval/R/HW.cond.R
HW.pval/R/create.model.R
HW.pval/R/test.chisq.R
HW.pval/R/HW.pval.R
HW.pval/R/test.gsq.R
HW.pval/R/test.rms.R
HW.pval/R/HW.plain.R
HW.pval/DESCRIPTION

HW.pval/man

HW.pval/man/test.chisq.Rd
HW.pval/man/HW.plain.Rd
HW.pval/man/HW.cond.Rd
HW.pval/man/HW.pval.Rd
HW.pval/man/test.rms.Rd
HW.pval/man/create.model.Rd
HW.pval/man/test.gsq.Rd
HW.pval/man/HW.pval-package.Rd
HW.pval/NAMESPACE

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