HiCseg: Detection of domains in HiC data

This package allows you to detect domains in HiC data by rephrasing this problem as a two-dimensional segmentation issue.

AuthorCeline Levy-Leduc
Date of publication2014-06-10 16:34:53
MaintainerCeline Levy-Leduc <celine.levy-leduc@agroparistech.fr>
LicenseGPL-2
Version1.1

View on CRAN

Files

HiCseg
HiCseg/inst
HiCseg/inst/doc
HiCseg/inst/doc/HiCseg.Rnw
HiCseg/inst/doc/HiCseg.pdf
HiCseg/src
HiCseg/src/Makevars
HiCseg/src/HiCseg_linkR.c
HiCseg/NAMESPACE
HiCseg/data
HiCseg/data/matrix.rda
HiCseg/R
HiCseg/R/HiCseg_linkC_R.R
HiCseg/vignettes
HiCseg/vignettes/vignette_refs.bib
HiCseg/vignettes/HiCseg.Rnw
HiCseg/MD5
HiCseg/DESCRIPTION
HiCseg/man
HiCseg/man/HiCseg_linkC_R.Rd HiCseg/man/matrix.Rd HiCseg/man/HiCseg-package.Rd

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