HiCseg: Detection of domains in HiC data
Version 1.1

This package allows you to detect domains in HiC data by rephrasing this problem as a two-dimensional segmentation issue.

AuthorCeline Levy-Leduc
Date of publication2014-06-10 16:34:53
MaintainerCeline Levy-Leduc <celine.levy-leduc@agroparistech.fr>
LicenseGPL-2
Version1.1
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("HiCseg")

Getting started

Package overview

Popular man pages

HiCseg_linkC_R: Link between C and R
HiCseg-package: Analysis of HiC data
matrix: Matrix of data
See all...

All man pages Function index File listing

Man pages

HiCseg_linkC_R: Link between C and R
HiCseg-package: Analysis of HiC data
matrix: Matrix of data

Functions

HiCseg Man page
HiCseg-package Man page
HiCseg_linkC_R Man page Source code
matrix Man page

Files

inst
inst/doc
inst/doc/HiCseg.Rnw
inst/doc/HiCseg.pdf
src
src/Makevars
src/HiCseg_linkR.c
NAMESPACE
data
data/matrix.rda
R
R/HiCseg_linkC_R.R
vignettes
vignettes/vignette_refs.bib
vignettes/HiCseg.Rnw
MD5
DESCRIPTION
man
man/HiCseg_linkC_R.Rd
man/matrix.Rd
man/HiCseg-package.Rd
HiCseg documentation built on May 19, 2017, 1:23 p.m.

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