Files in HodgesTools
Common Use Tools for Genomic Analysis
MD5
NEWS.md
README.md
NAMESPACE
DESCRIPTION
R/cpg_analysis.R
R/read_bed.R
R/createManhattandQQ.R
R/plot_HOMERTFs.R
R/helper_makeBigTableFromListOfTables.R
R/helper_collapseTableByLevenSim.R
R/append_section_to_ini.R
R/helper_getMaxLevenSimCol.R
inst/extdata/cov5root_12hr_gain.CpGcount.txt
inst/extdata/config.ini
inst/extdata/test_BED3_badChrCol.bed
inst/extdata/cov5root_6hr_gain.nucOutput_gc.txt
inst/extdata/test_BED6_nonstandard456Cols.bed
inst/extdata/createManhattandQQ_example_sum_stats.txt
inst/extdata/cov5root_12hr_gain.nucOutput_gc.txt
inst/extdata/test_BED3.bed
inst/extdata/test_BED4.bed
inst/extdata/createManhattandQQ_example_highlights_file.txt
inst/extdata/test_BED6.bed
inst/extdata/test_BED8.bed
inst/extdata/cov5root_6hr_gain.CpGcount.txt
inst/extdata/test_HOMER/cluster2.knownResults.txt
inst/extdata/test_HOMER/cluster4.knownResults.txt
inst/extdata/test_HOMER/cluster5.knownResults.txt
inst/extdata/test_HOMER/cluster3.knownResults.txt
inst/extdata/test_HOMER/cluster1.knownResults.txt
man/createManhattandQQ.Rd
man/cpg_analysis.Rd
man/helper_makeBigTableFromListOfStandardTables.Rd
man/read_bed.Rd
man/append_section_to_ini.Rd
man/helper_collapseTableByLevenSim.Rd
man/plot_HOMERTFs.Rd
man/helper_getMaxLevenSimCol.Rd
