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A fragmentation spectra detection pipeline for high-throughput LC/HRMS data processing using peaklists generated by the 'IDSL.IPA' workflow <doi:10.1021/acs.jproteome.2c00120>. The 'IDSL.CSA' package can deconvolute fragmentation spectra from Composite Spectra Analysis (CSA), Data Dependent Acquisition (DDA) analysis, and various Data-Independent Acquisition (DIA) methods such as MS^E, All-Ion Fragmentation (AIF) and SWATH-MS analysis. The 'IDSL.CSA' package was introduced in <doi:10.1021/acs.analchem.3c00376>.
Package details |
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Author | Sadjad Fakouri-Baygi [aut] (<https://orcid.org/0000-0002-6864-6911>), Dinesh Barupal [cre, aut] (<https://orcid.org/0000-0002-9954-8628>) |
Maintainer | Dinesh Barupal <dinesh.barupal@mssm.edu> |
License | MIT + file LICENSE |
Version | 1.2 |
URL | https://github.com/idslme/idsl.csa |
Package repository | View on CRAN |
Installation |
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