BatchStatsReport: Batch Generation of Statistic Report

In IFC: Tools for Imaging Flow Cytometry

Batch Generation of Statistic Report

Description

Generates statistics report on batch of files or 'IFC_data' objects.

Usage

BatchStatsReport(fileName, obj, stats, gating, display_progress = FALSE, ...)

Arguments

fileName, obj	either one or the other. Path to file(s) to read from for 'fileName' or list of 'IFC_data' objects for obj.
stats	template defining stats to compute as extracted by getSTATSREPORT().
gating	an 'IFC_gating' object as extracted by readGatingStrategy(). Default is missing. If not missing, each ‘IFC_data' provided in ’obj' or read from 'fileName' will be passed to applyGatingStrategy() before creating the report.
display_progress	whether to display a progress bar. Default is TRUE.
...	other parameters to be passed.

Value

a data.frame of statistics

IFC documentation built on Sept. 14, 2023, 1:08 a.m.