IMAGE: Integrated Methylation QTL Mapping and Allele-Specific Analysis

Performs mQTL (methylation quantitative-trait locus) mapping in bisulfite sequencing studies by fitting a binomial mixed model and then incorporating the allelic-specific methylation pattern. Based on Fan, Yue; Vilgalys, Tauras P.; Sun, Shiquan; Peng, Qinke; Tung, Jenny; Zhou, Xiang (2019) <doi:10.1101/615039>.

Getting started

Package details

AuthorXiang Zhou [aut], Shiquan Sun [aut], Yue Fan [aut], Michael Kleinsasser [cre]
MaintainerMichael Kleinsasser <[email protected]>
LicenseGPL-2
Version1.0
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("IMAGE")

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IMAGE documentation built on July 28, 2019, 5:02 p.m.