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INSPIRE: Inferring Shared Modules from Multiple Gene Expression Datasets with Partially Overlapping Gene Sets
A method to infer modules of co-expressed genes and the dependencies among the modules from multiple expression datasets that may contain different sets of genes. Please refer to: Extracting a low-dimensional description of multiple gene expression datasets reveals a potential driver for tumor-associated stroma in ovarian cancer, Safiye Celik, Benjamin A. Logsdon, Stephanie Battle, Charles W. Drescher, Mara Rendi, R. David Hawkins and Su-In Lee (2016) <DOI:10.1186/s13073-016-0319-7>.
Getting started
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Package details |
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| Author | Safiye Celik |
| Maintainer | Safiye Celik <[email protected]> |
| License | GPL (>= 2) |
| Version | 1.5 |
| URL | inspire.cs.washington.edu |
| Package repository | View on CRAN |
| Installation |
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