createFastIhtPrior | R Documentation |
createFastIhtPrior
creates a fastIHT Cyclops prior object for use with fitCyclopsModel
.
createFastIhtPrior( K, penalty = 0, exclude = c(), forceIntercept = FALSE, fitBestSubset = FALSE, initialRidgeVariance = 10000, tolerance = 1e-08, maxIterations = 10000, threshold = 1e-06 )
K |
Maximum # of non-zero covariates |
penalty |
Specifies the IHT penalty |
exclude |
A vector of numbers or covariateId names to exclude from prior |
forceIntercept |
Logical: Force intercept coefficient into regularization |
fitBestSubset |
Logical: Fit final subset with no regularization |
initialRidgeVariance |
Numeric: variance used for algorithm initiation |
tolerance |
Numeric: maximum abs change in coefficient estimates from successive iterations to achieve convergence |
maxIterations |
Numeric: maximum iterations to achieve convergence |
threshold |
Numeric: absolute threshold at which to force coefficient to 0 |
An IHT Cyclops prior object of class inheriting from
"cyclopsPrior"
for use with fitCyclopsModel
.
nobs = 500; ncovs = 100 prior <- createFastIhtPrior(K = 3, penalty = log(ncovs), initialRidgeVariance = 1 / log(ncovs))
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