add.child.meiosis.nodes | Replace CPTs for mixture contributor a Father, given Child... |
add.motherchild.likd.node | Replace CPTs for mixture contributor a Father, given Child... |
add.relative.likd.node | Replace CPTs for mixture contributor a Father, given Child... |
as.gt | Extract genotype profile for a single contributor from rGTs... |
checkpeaks | Check and modify database to have positive frequencies for... |
convertIBD | Convert relationship information to IBD pattern distribution |
delete.DQnodes | Delete D and Q dummy nodes from all Bayes nets in mixture |
emperors | IBD pattern distribution in the Iulius-Claudius pedigree |
expr.make.findings | Coding additional findings as expression |
formats | Formats |
gt2aca | Converts genotype profiles to allele count arrays |
intoMix | Edit output from rGTs to omit individuals with NA amounts of... |
KinMixLite-package | Inference About Relationships from DNA Mixtures |
logL.UKX | Evaluates mixture log likelihood for unknown contributors... |
logLX | Evaluates mixture log likelihood when extra findings present |
loop.rpt.IBD | Analysis of DNA mixtures with familial relationships by... |
make.profile | Convert genotype profile to reference profile format |
mixMLX | Maximises mixture likelihood when extra findings present |
pedigreeIBD | Construct IBD pattern distribution from pedigree |
plot.IBD | Plot IBD patterns and pattern distributions |
protected | Catch numerical errors, and return -Inf |
protected.mixML | Protect against numerical errors in maximum likelihood... |
require.compiled | Force compilation of all BNs in a DNA mixture model |
rGTs | Simulate random genotype profiles and DNA samples for related... |
rni | Random number initialiser supporting spontaneous replication |
rpt.AMEL | Replace CPTs for AMEL marker in a DNA mixture |
rpt.IBD | Replacing CPTs for selected mixture contributors with... |
rpt.UAF | Replace CPTs in a DNA mixture to model uncertain allele... |
size | Calculate and display total size of BN tables for a DNA... |
test2data | Small data set for demonstrating some capabilities of KinMix... |
wlr | Computes paternity LR using WLR method |
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