expr.make.findings: Coding additional findings as expression
In KinMixLite: Inference About Relationships from DNA Mixtures
expr.make.findings R Documentation
Coding additional findings as expression
Description
Returns an expression that will be evaluated
in logL.UKX whenever the likelihood of the model is calculated using the
current method, and encodes the additional findings needed to implement the
method; the details of the model and the extra information needed are held in the list z
Usage
expr.make.findings(z)
Arguments
z
A list specifying the additional findings; for the format, see Details
Details
Each component of the list z is a list encoding a particular type of additional finding: the first component of this (sub-)list being a character string specifying the type of finding, and the remainder of its components being named parameters giving details of the finding. The types of finding and the valid parameters of each are as follows:
Maleind: index of relevant contributor: which ‘unknown’ contributor are we modelling by amending his CPTs?
Femaleind: index of relevant contributor
Rlikdaca: allele count array, cgt: character string naming genotype profile data frame, evid: character string naming list with one component for each marker, whose value is the evidence
Acaind: index of relevant contributor, aca: allele count array
Cacaind: index of relevant contributor, aca: allele count array
Denomno parameters
If z is NULL, then there are no additional findings.
Value
Expression encoding the additional findings.
Author(s)
Peter Green (P.J.Green@bristol.ac.uk)
KinMixLite documentation built on Oct. 9, 2024, 9:07 a.m.
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| expr.make.findings | R Documentation |
Coding additional findings as expression
Description
Returns an expression that will be evaluated in logL.UKX whenever the likelihood of the model is calculated using the current method, and encodes the additional findings needed to implement the method; the details of the model and the extra information needed are held in the list z
Usage
expr.make.findings(z)
Arguments
z |
A list specifying the additional findings; for the format, see Details |
Details
Each component of the list z is a list encoding a particular type of additional finding: the first component of this (sub-)list being a character string specifying the type of finding, and the remainder of its components being named parameters giving details of the finding. The types of finding and the valid parameters of each are as follows:
Maleind: index of relevant contributor: which ‘unknown’ contributor are we modelling by amending his CPTs?Femaleind: index of relevant contributorRlikdaca: allele count array,cgt: character string naming genotype profile data frame,evid: character string naming list with one component for each marker, whose value is the evidenceAcaind: index of relevant contributor,aca: allele count arrayCacaind: index of relevant contributor,aca: allele count arrayDenomno parameters
If z is NULL, then there are no additional findings.
Value
Expression encoding the additional findings.
Author(s)
Peter Green (P.J.Green@bristol.ac.uk)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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