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LDlinkR: Calculating Linkage Disequilibrium (LD) in Human Population Groups of Interest
Provides access to the 'LDlink' API (<https://ldlink.nih.gov/?tab=apiaccess>) using the R console. This programmatic access facilitates researchers who are interested in performing batch queries in 1000 Genomes Project (2015) <doi:10.1038/nature15393> data using 'LDlink'. 'LDlink' is an interactive and powerful suite of web-based tools for querying germline variants in human population groups of interest. For more details, please see Machiela et al. (2015) <doi:10.1093/bioinformatics/btv402>.
Getting started
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Package details |
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| Author | Timothy A. Myers [aut, cre] (<https://orcid.org/0000-0001-8127-3446>), Stephen J. Chanock [aut], Mitchell J. Machiela [aut] (<https://orcid.org/0000-0001-6538-9705>) |
| Maintainer | Timothy A. Myers <myersta@mail.nih.gov> |
| License | GPL (>= 2) |
| Version | 1.3.0 |
| URL | https://ldlink.nih.gov |
| Package repository | View on CRAN |
| Installation |
Install the latest version of this package by entering the following in R:
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Try the LDlinkR package in your browser
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