LEAPFrOG: Likelihood Estimation of Admixture in Parents From Offspring Genotypes

Contains LEAPFrOG Gradient Optimisation and Expectation Maximisation functions for inferring parental admixture proportions from an offspring with SNP genotypes.

Install the latest version of this package by entering the following in R:
install.packages("LEAPFrOG")
AuthorDaniel JM Crouch & Michael E Weale
Date of publication2014-08-13 16:42:15
MaintainerDaniel JM Crouch <daniel.crouch@oncology.ox.ac.uk>
LicenseGPL
Version1.0.7
http://sites.google.com/site/mikeweale

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Functions

BEAPFrOG } \title{Bayesian Estimation of Admixture in Parental Man page
constrOptim2 Man page
LEAPFrOG_EM} \title{LEAPFrOG Expectation Maximisation } \descrip Man page
LEAPFrOG-package} \alias{LEAPFrOG-package} \docType{package} \ti Man page
LEAPFrOG_plot} \title{LEAPFrOG plotting function } \description{ Man page
LEAPFrOG} \title{LEAPFrOG} \description{Provides estimates of ad Man page

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

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