LEAPFrOG: Likelihood Estimation of Admixture in Parents From Offspring Genotypes
Version 1.0.7

Contains LEAPFrOG Gradient Optimisation and Expectation Maximisation functions for inferring parental admixture proportions from an offspring with SNP genotypes.

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AuthorDaniel JM Crouch & Michael E Weale
Date of publication2014-08-13 16:42:15
MaintainerDaniel JM Crouch <daniel.crouch@oncology.ox.ac.uk>
LicenseGPL
Version1.0.7
URL http://sites.google.com/site/mikeweale
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("LEAPFrOG")

Man pages

BEAPFrOG: Bayesian Estimation of Admixture in Parental From Offspring...
constrOptim2: constrOptim2
LEAPFrOG: LEAPFrOG
LEAPFrOG_EM: LEAPFrOG Expectation Maximisation
LEAPFrOG-package: Likelihood Estimation of Admixture in Parents From Offspring...
LEAPFrOG_plot: LEAPFrOG plotting function

Functions

BEAPFrOG } \title{Bayesian Estimation of Admixture in Parental Man page
BEAPFrOG Source code
LEAPFrOG Source code
LEAPFrOG-package} \alias{LEAPFrOG-package} \docType{package} \ti Man page
LEAPFrOG_EM Source code
LEAPFrOG_EM} \title{LEAPFrOG Expectation Maximisation } \descrip Man page
LEAPFrOG_plot Source code
LEAPFrOG_plot} \title{LEAPFrOG plotting function } \description{ Man page
LEAPFrOG} \title{LEAPFrOG} \description{Provides estimates of ad Man page
constrOptim2 Man page Source code

Files

COPYING
NAMESPACE
R
R/LEAPFrOG.R
MD5
DESCRIPTION
man
man/constrOptim2.Rd
man/BEAPFrOG.Rd
man/LEAPFrOG.Rd
man/LEAPFrOG_EM.Rd
man/LEAPFrOG_plot.Rd
man/LEAPFrOG-package.Rd
LEAPFrOG documentation built on May 20, 2017, 1:29 a.m.