LEAPFrOG: Likelihood Estimation of Admixture in Parents From Offspring Genotypes

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Contains LEAPFrOG Gradient Optimisation and Expectation Maximisation functions for inferring parental admixture proportions from an offspring with SNP genotypes.

Author
Daniel JM Crouch & Michael E Weale
Date of publication
2014-08-13 16:42:15
Maintainer
Daniel JM Crouch <daniel.crouch@oncology.ox.ac.uk>
License
GPL
Version
1.0.7
URLs

View on CRAN

Man pages

BEAPFrOG
Bayesian Estimation of Admixture in Parental From Offspring...
constrOptim2
constrOptim2
LEAPFrOG
LEAPFrOG
LEAPFrOG_EM
LEAPFrOG Expectation Maximisation
LEAPFrOG-package
Likelihood Estimation of Admixture in Parents From Offspring...
LEAPFrOG_plot
LEAPFrOG plotting function

Files in this package

LEAPFrOG
LEAPFrOG/COPYING
LEAPFrOG/NAMESPACE
LEAPFrOG/R
LEAPFrOG/R/LEAPFrOG.R
LEAPFrOG/MD5
LEAPFrOG/DESCRIPTION
LEAPFrOG/man
LEAPFrOG/man/constrOptim2.Rd
LEAPFrOG/man/BEAPFrOG.Rd
LEAPFrOG/man/LEAPFrOG.Rd
LEAPFrOG/man/LEAPFrOG_EM.Rd
LEAPFrOG/man/LEAPFrOG_plot.Rd
LEAPFrOG/man/LEAPFrOG-package.Rd