LFDR.MLE: Estimation of the Local False Discovery Rates by Type II Maximum Likelihood Estimation
Version 1.0

Suite of R functions for the estimation of the local false discovery rate (LFDR) using Type II maximum likelihood estimation (MLE).

Browse man pages Browse package API and functions Browse package files

AuthorYe Yang, Marta Padilla, Alaa Ali, Kyle Leckett, Zhenyu Yang, Zuojing Li, Corey M. Yanofsky and David R. Bickel
Date of publication2015-08-06 15:18:51
MaintainerM. Padilla <padilla.mpf@gmail.com>
LicenseGPL-3
Version1.0
URL http://www.cran.r-project.org http://www.statomics.com
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("LFDR.MLE")

Man pages

dabsTd: Density of the absolute Student t Distribution.
lfdr.l1o: Leave-one-out (L1O) and leave-half-out (LHO) method for LFDR...
lfdr.mdl: Minimum description length (MDL) method for estimation of...
lfdr.mle: Type II Maximum likelihood estimate of LFDR (LFDR-MLE).
LFDR.MLE-internal: Internal Functions and Methods
LFDR.MLE-package: Estimation of the Local False Discovery Rate using Type II...

Functions

LFDR.MLE Man page
LFDR.MLE-package Man page
MakeNames Man page Source code
[ Man page
[,est.lfdrmle,ANY,missing-method Man page
[-methods Man page
are Man page Source code
are_null Man page Source code
are_prob Man page Source code
are_unk Source code
as.numeric Man page
as.numeric,est.lfdrmle-method Man page
as.numeric-methods Man page
assert.are Man page Source code
assert.is Man page Source code
dabsTd Man page Source code
est.lfdrmle-class Man page
est2list Man page Source code
get_groups Man page Source code
get_n.groups Man page Source code
get_null.groups Man page Source code
get_null.n.groups Man page Source code
get_simulated_W Man page Source code
internals Man page
is_any Man page Source code
is_err Man page Source code
is_error Man page Source code
is_prob Man page
is_prob,est.lfdrmle-method Man page
is_prob,numeric-method Man page
is_prob-methods Man page
is_unk Man page Source code
is_vide Man page
k.N_wlik Source code
k.checkings Source code
k.get_wd_max Source code
k.get_wlfdr Source code
k.get_wp0_max Source code
k.lfdr.mle Source code
k.lo Source code
k.log_wlik_mixture Source code
k.perfeat Source code
length Man page
length,est.lfdrmle-method Man page
length-methods Man page
lfdr.hats Man page Source code
lfdr.l1o Man page Source code
lfdr.lho Man page Source code
lfdr.lo Man page Source code
lfdr.mdl Man page Source code
lfdr.mdlo Man page Source code
lfdr.mle Man page Source code
make_labels Man page Source code
mix.ye.mle Source code
names Man page
names,est.lfdrmle-method Man page
names-methods Man page
names<-,est.lfdrmle,character-method Man page
names<--methods Man page
new_est.lfdrmle Man page Source code
nsize Man page Source code
pure.ye.mle Source code
rFUN_generator Man page Source code
sameAsX_names Man page Source code
simulated_W Man page Source code
vect2string Man page Source code
vectorized.dabsTd Man page Source code
ye.mle Man page Source code

Files

NAMESPACE
R
R/LFDR.MLEye.v0.R
MD5
DESCRIPTION
man
man/LFDR.MLE-package.Rd
man/dabsTd.Rd
man/lfdr.mle.Rd
man/lfdr.mdl.Rd
man/lfdr.l1o.Rd
man/LFDR.MLE-internal.Rd
LFDR.MLE documentation built on May 20, 2017, 1:14 a.m.