LPmerge: Merging linkage maps by linear programming
Version 1.6

LPmerge creates a consensus genetic map by merging linkage maps from different populations. The software uses linear programming (LP) to efficiently minimize the mean absolute error between the consensus map and the linkage maps. This minimization is performed subject to linear inequality constraints that ensure the ordering of the markers in the linkage maps is preserved. When marker order is inconsistent between linkage maps, a minimum set of ordinal constraints is deleted to resolve the conflicts.

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AuthorJeffrey Endelman
Date of publication2014-08-17 01:14:04
MaintainerJeffrey Endelman <endelman@wisc.edu>
LicenseGPL-3
Version1.6
URL http://potatobreeding.cals.wisc.edu/software
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("LPmerge")

Getting started

Man pages

LPmerge: Merging linkage maps by linear programming.

Functions

LPmerge Man page Source code

Files

inst
inst/CITATION
NAMESPACE
R
R/LPmerge.R
MD5
DESCRIPTION
man
man/LPmerge.Rd
LPmerge documentation built on May 20, 2017, 2:08 a.m.