LifeHist: Life History Models of Individuals

Likelihood-based estimation of individual growth and sexual maturity models for organisms, usually fish and invertebrates. It includes methods for data organization, plotting standard exploratory and analytical plots, predictions.

Author
Ruben H. Roa-Ureta
Date of publication
2015-09-03 12:20:03
Maintainer
Ruben H. Roa-Ureta <ruben.roa.ureta@mail.com>
License
GPL (>= 2)
Version
1.0-1

View on CRAN

Man pages

as.GroAgeData
Create a Data Object to Fit Individual Growth Models with...
BlackAngler.agematdat
Black Anglerfish Age, Sex, Month, Maturity Stage Data
BlackAngler.lenmatdat
Black Anglerfish Length, Sex, Month, Maturity Stage Data
BlackAngler.wgtmatdat
Black Anglerfish Body Weight, Sex, Month, Maturity Stage Data
deltamethod
First-order Taylor Series Expansion of Functions of Random...
GroAgeData
Class Attribute of LifeHist Data Object
GroAgeExp
Class Attribute of LifeHist Exploratory Model Object
groageexp_1
Exploratory Growth Modeling with Age and Length Data
GroAgeFit
Fit Growth Model with Age and Length Data by Maximum...
GroAgeMod
Class Attribute of LifeHist Fitted Model Object
groagemod_1
Predictions from an Object of Class GroAgeMod
ksbream
King Soldier Bream Individual Biological Data
LifeHist-package
\Sexpr[results=rd,stage=build]{tools:::Rd_package_title("LifeHist")}
MatCount
Build Databases for Sexual Maturity Modeling by Logistic...
MatData
Class Attribute of LifeHist Data Object
MatFit
Wrapper Function to Estimate a 2- or 3-Parameters Logistic...
plot.GroAgeData
Exploratory Analysis of Agen and Length Individual Data
plot.GroAgeExp
Exploratory Modeling of Individual Growth with Age and Length...
plot.GroAgeMod
Examination of Results from Fitting Growth Models
plot.MatData
Exploratory Analisys of a Logistic Model on a Graphical...

Files in this package

LifeHist
LifeHist/NAMESPACE
LifeHist/data
LifeHist/data/BlackAngler.wgtmatdat.rda
LifeHist/data/BlackAngler.lenmatdat.rda
LifeHist/data/ksbream.rda
LifeHist/data/BlackAngler.agematdat.rda
LifeHist/R
LifeHist/R/groageexp_1.R
LifeHist/R/plot.GroAgeMod.R
LifeHist/R/MatFit.R
LifeHist/R/as.GroAgeData.R
LifeHist/R/GroAgeMod.R
LifeHist/R/plot.GroAgeExp.R
LifeHist/R/MatData.R
LifeHist/R/GroAgeFit.R
LifeHist/R/plot.GroAgeData.R
LifeHist/R/MatCount.R
LifeHist/R/deltamethod.R
LifeHist/R/plot.MatData.R
LifeHist/R/LifeHist-internal.R
LifeHist/R/GroAgeExp.R
LifeHist/R/groagemod_1.R
LifeHist/R/GroAgeData.R
LifeHist/MD5
LifeHist/build
LifeHist/build/partial.rdb
LifeHist/DESCRIPTION
LifeHist/man
LifeHist/man/MatFit.Rd
LifeHist/man/groageexp_1.Rd
LifeHist/man/as.GroAgeData.Rd
LifeHist/man/ksbream.Rd
LifeHist/man/LifeHist-package.Rd
LifeHist/man/BlackAngler.lenmatdat.Rd
LifeHist/man/GroAgeData.Rd
LifeHist/man/groagemod_1.Rd
LifeHist/man/plot.GroAgeMod.Rd
LifeHist/man/GroAgeExp.Rd
LifeHist/man/plot.GroAgeData.Rd
LifeHist/man/MatData.Rd
LifeHist/man/BlackAngler.agematdat.Rd
LifeHist/man/BlackAngler.wgtmatdat.Rd
LifeHist/man/deltamethod.Rd
LifeHist/man/plot.GroAgeExp.Rd
LifeHist/man/GroAgeFit.Rd
LifeHist/man/MatCount.Rd
LifeHist/man/plot.MatData.Rd
LifeHist/man/GroAgeMod.Rd