LncMod: Predicting Modulator and Functional/Survival Analysis

Predict modulators regulating the ability of effectors to regulate their targets and produce modulator-effector-target triplets followed by goterm functional enrichment and survival analysis.This is mainly applied to long non-coding RNAs (lncRNAs) as candidate modulators regulating the ability of transcription factors (TFs) to regulate their corresponding targets.

Author
Yongsheng Li,Zishan Wang,Juan Xu*,Xia Li*
Date of publication
2015-06-27 13:24:19
Maintainer
Zishan Wang <azureskyeric@gmail.com>
License
GPL-2
Version
1.1

View on CRAN

Man pages

datatests
Data for Examples
LncMod-package
LncMod
tri.app
Modulators Prediction
tri.basic
Overview of Triplets' Expression
tri.enrich
Modulator Functional Enrichment
tri.surv
Survival Analysis of Triplets

Files in this package

LncMod
LncMod/NAMESPACE
LncMod/data
LncMod/data/datatests.rda
LncMod/R
LncMod/R/tri.surv.R
LncMod/R/tri.app.R
LncMod/R/tri.basic.R
LncMod/R/tri.enrich.R
LncMod/MD5
LncMod/DESCRIPTION
LncMod/man
LncMod/man/LncMod-package.Rd
LncMod/man/tri.surv.Rd
LncMod/man/tri.basic.Rd
LncMod/man/tri.app.Rd
LncMod/man/tri.enrich.Rd
LncMod/man/datatests.Rd