LncMod: Predicting Modulator and Functional/Survival Analysis
Version 1.1

Predict modulators regulating the ability of effectors to regulate their targets and produce modulator-effector-target triplets followed by goterm functional enrichment and survival analysis.This is mainly applied to long non-coding RNAs (lncRNAs) as candidate modulators regulating the ability of transcription factors (TFs) to regulate their corresponding targets.

AuthorYongsheng Li,Zishan Wang,Juan Xu*,Xia Li*
Bioconductor views function lncRNA long non-coding RNA modulator survival triplet
Date of publication2015-06-27 13:24:19
MaintainerZishan Wang <azureskyeric@gmail.com>
LicenseGPL-2
Version1.1
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("LncMod")

Getting started

Package overview

Popular man pages

datatests: Data for Examples
LncMod-package: LncMod
tri.app: Modulators Prediction
tri.basic: Overview of Triplets' Expression
tri.enrich: Modulator Functional Enrichment
tri.surv: Survival Analysis of Triplets
See all...

All man pages Function index File listing

Man pages

datatests: Data for Examples
LncMod-package: LncMod
tri.app: Modulators Prediction
tri.basic: Overview of Triplets' Expression
tri.enrich: Modulator Functional Enrichment
tri.surv: Survival Analysis of Triplets

Functions

datatests Man page
tri.app Man page Source code
tri.basic Man page Source code
tri.enrich Man page Source code
tri.surv Man page Source code

Files

NAMESPACE
data
data/datatests.rda
R
R/tri.surv.R
R/tri.app.R
R/tri.basic.R
R/tri.enrich.R
MD5
DESCRIPTION
man
man/LncMod-package.Rd
man/tri.surv.Rd
man/tri.basic.Rd
man/tri.app.Rd
man/tri.enrich.Rd
man/datatests.Rd
LncMod documentation built on May 19, 2017, 10:47 p.m.