LocFDRPois: Functions for Performing Local FDR Estimation when Null and Alternative are Poisson

The main idea of the Local FDR algorithm is to estimate both proportion of null observations and the ratio of null and alternative densities. In the case that there are many null observations, this can be done reliably, through maximum likelihood or generalized linear models. This package implements this in the case that the null and alternative densities are Poisson.

Install the latest version of this package by entering the following in R:
install.packages("LocFDRPois")
AuthorKris Sankaran [aut, cre]
Date of publication2015-05-05 06:43:01
MaintainerKris Sankaran <kriss1@stanford.edu>
LicenseGPL-2
Version1.0.0

View on CRAN

Files

inst
inst/doc
inst/doc/localfdr-intro-vignette.R
inst/doc/localfdr-intro-vignette.html
inst/doc/localfdr-intro-vignette.Rmd
NAMESPACE
R
R/locfdr.R
vignettes
vignettes/localfdr-intro-vignette.Rmd
MD5
build
build/vignette.rds
DESCRIPTION
man
man/LocfdrFuns.Rd man/LLConstructor.Rd man/NullDensity.Rd man/AnalyticalOptim.Rd man/SummarizeLocfdr.Rd man/BuildTable.Rd man/MixtureDensity.Rd

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

Please suggest features or report bugs with the GitHub issue tracker.

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