plot.LocalControlCR: Plot cumulative incidence functions (CIFs) from Local...

In LocalControl: Nonparametric Methods for Generating High Quality Comparative Effectiveness Evidence

Plot cumulative incidence functions (CIFs) from Local Control.

Description

Given the results from LocalControl with outcomeType = "survival", plot a corrected and uncorrected cumulative incidence function (CIF) for both groups.

Usage

## S3 method for class 'LocalControlCR'
plot(
  x,
  ...,
  rad2plot,
  xlim,
  ylim = c(0, 1),
  col1 = "blue",
  col0 = "red",
  xlab = "Time",
  ylab = "Cumulative incidence",
  legendLocation = "topleft",
  main = "",
  group1 = "Treatment 1",
  group0 = "Treatment 0"
)

Arguments

x	Return object from LocalControl with outcomeType = "survival".
...	Arguments passed on to graphics::plot
rad2plot	The index or name ("rad_#") of the radius to plot. By default, the radius with pct_informative closest to 0.8 will be selected.
xlim	The x axis bounds. Defaults to c(0, max(lccrResults$Failtimes)).
ylim	The y axis bounds. Defaults to c(0,1).
col1	The plot color for group 1.
col0	The plot color for group 0.
xlab	The x axis label. Defaults to "Time".
ylab	The y axis label. Defaults to "Cumulative incidence".
legendLocation	The location to place the legend. Default "topleft".
main	The main plot title. Default is empty.
group1	The name of the primary group (Treatment 1).
group0	The name of the secondary group (Treatment 0).

References

• Lauve NR, Nelson SJ, Young SS, Obenchain RL, Lambert CG. LocalControl: An R Package for Comparative Safety and Effectiveness Research. Journal of Statistical Software. 2020. p. 1–32. Available from: http://dx.doi.org/10.18637/jss.v096.i04

Examples

data("cardSim")
results = LocalControl(data = cardSim,
                       outcomeType = "survival",
                       outcomeColName = "status",
                       timeColName = "time",
                       treatmentColName = "drug",
                       treatmentCode = 1,
                       clusterVars = c("age", "bmi"))
plot(results)

LocalControl documentation built on May 21, 2022, 1:05 a.m.