iNMF_data_gen: Generate the simulated dataset with three modalities as the...

In M3JF: Multi-Modal Matrix Joint Factorization for Integrative Multi-Omics Data Analysis

Generate the simulated dataset with three modalities as the work iNMF

Description

Generate the simulated dataset with three modalities as the work iNMF

Usage

iNMF_data_gen(Xs_dim_list=list(c(100,100),c(100,100),c(100,100)),
mod_dim_list=list(matrix(c(20,30,20,30,20,30,20,30),4,2),
matrix(c(20,20,30,30,20,30,20,30),4,2),
matrix(c(26,24,26,24,20,30,20,30),4,2)),e_u=0.15, e_s=0.9, e_h=0)

Arguments

Xs_dim_list	a list of data matrix dimensions for multiple modality data
mod_dim_list	a list of the dimensions of each cluster and their features
e_u	the level of uniform noise
e_s	signal to noise ratio
e_h	block adding probability

Value

res, a list of length 2, where the first element is a list of simulated data, while the second element is a vector indicating the true label of each sample.

Examples

iNMF_data <- iNMF_data_gen(Xs_dim_list=list(c(100,100),c(100,100),c(100,100)),
mod_dim_list=list(matrix(c(20,30,20,30,20,30,20,30),4,2),
matrix(c(20,20,30,30,20,30,20,30),4,2),
matrix(c(26,24,26,24,20,30,20,30),4,2)),e_u=0.15, e_s=0.9, e_h=0)

M3JF documentation built on Aug. 14, 2023, 9:08 a.m.