Files in MALDIcellassay

Automated MALDI Cell Assays Using Dose-Response Curve Fitting

NEWS.md README.md R/sdMassSpectrum.R R/calculateCurveFit.R R/filterVariance.R R/normalize.R R/calculatePeakstatistics.R R/shiftMassAxis.R R/aggregateSpectra.R R/loadSpectra.R R/getMzShift.R R/MALDIassay_Class.R R/extractSpots.R R/detectPeaks.R R/plotPeak.R R/qualitiyMetrics.R R/peaks2df.R R/stabilizeVariance.R R/plotCurves.R R/example_data.R R/repairMetaData.R R/preprocess.R R/normalizeByFactor.R R/getNormFactors.R R/checkRecalibration.R R/getters.R R/calculateChauvenetCriterion.R R/helpers.R R/extractIntensity.R R/fitCurve.R R/getEstimates.R inst/doc/Example.R inst/doc/Example.Rmd vignettes/Example.Rmd man/calculateVPrime.Rd man/loadSpectraMzML.Rd man/normalize.Rd man/getPeakStatistics.Rd man/calculateChauvenetCriterion.Rd man/getVarFilterMethod.Rd man/getSinglePeaks.Rd man/getNormMzTol.Rd man/getIntensityMatrix.Rd man/loadSpectra.Rd man/getAppliedMzShift.Rd man/getDirectory.Rd man/shiftMassAxis.Rd man/getAvgPeaks.Rd man/checkRecalibration.Rd man/isMALDIassay.Rd man/getNormMethod.Rd man/peaks2df.Rd man/getAvgSpectra.Rd man/calculateCurveFit.Rd man/getConc.Rd man/MALDIassay-class.Rd man/transformConc2Log.Rd man/calculatePeakStatistics.Rd man/filterVariance.Rd man/getSNR.Rd man/calculateSSMD.Rd man/calculateZPrime.Rd man/Blank2022spec.Rd man/getCurveFits.Rd man/getMzShift.Rd man/fitCurve.Rd man/Blank2022res.Rd man/normalizeByFactor.Rd man/getSpots.Rd man/Blank2022intmat.Rd man/getMzFromMzIdx.Rd man/extractSpots.Rd man/getAppliedNormFactors.Rd man/getSingleSpecIntensity.Rd man/getBinTol.Rd man/Blank2022peaks.Rd man/getRecalibrationError.Rd man/getNormFactors.Rd man/getAllMz.Rd man/extractIntensity.Rd man/plotPeak.Rd man/getNormMz.Rd man/plotCurves.Rd man/sdMassSpectrum.Rd man/getFittingParameters.Rd