MANCIE: Matrix Analysis and Normalization by Concordant Information Enhancement

High-dimensional data integration is a critical but difficult problem in genomics research because of potential biases from high-throughput experiments. We present MANCIE, a computational method for integrating two genomic data sets with homogenous dimensions from different sources based on a PCA procedure as an approximation to a Bayesian approach.

Author
Tao Wang, Chongzhi Zang
Date of publication
2016-03-02 01:14:19
Maintainer
Tao Wang <tao.wang@utsouthwestern.edu>
License
GPL-2
Version
1.4

View on CRAN

Man pages

mancie
Matrix Analysis and Normalization by Concordant Information...
mancie_example
The demo dataset for the 'MANCIE' package
summarize_mat
Summarize information in the supplementary matrix

Files in this package

MANCIE
MANCIE/NAMESPACE
MANCIE/NEWS
MANCIE/data
MANCIE/data/mancie_example.rda
MANCIE/data/datalist
MANCIE/R
MANCIE/R/mancie.R
MANCIE/R/summarize_mat.R
MANCIE/R/get_nearby.R
MANCIE/MD5
MANCIE/DESCRIPTION
MANCIE/man
MANCIE/man/summarize_mat.Rd
MANCIE/man/mancie.Rd
MANCIE/man/mancie_example.Rd