R/data.R

In MAPITR: MArginal ePIstasis Test for Regions

#' @name MAPITR_TestData_Genotypes
#'
#' @title MAPITR TestData Genotypes
#'
#' @docType data
#'
#' @description A simulated dataset of genotypes for use in unit
#' tests
#'
#' @format A data frame with 500 rows (individuals) and 750 
#' variables (SNPs)
#'
#' @source Manually created
#'
#' @keywords data
#'
NULL

#' @name MAPITR_TestData_Phenotype
#'
#' @title MAPITR TestData Phenotype
#'
#' @docType data
#'
#' @description A simulated set of phenotypes for use in unit
#' tests
#'
#' @format A data frame with 500 rows (individuals) and 1 
#' variables (phenotype)
#'
#' @source Manually created
#'
#' @keywords data
#'
NULL

#' @name MAPITR_TestData_Pathways
#'
#' @title MAPITR TestData Pathways
#'
#' @docType data
#'
#' @description A simulated set of pathways for use in unit
#' tests
#'
#' @format A data frame with 5 rows (pathways) and 2 variables 
#' (pathway name, comma-separated list of pathway column indices)
#'
#' @source Manually created
#'
#' @keywords data
#'
NULL

#' @name MAPITR_TestData_PCs
#'
#' @title MAPITR TestData PCs
#'
#' @docType data
#'
#' @description Top 10 principal components from the simulated
#' genotypes for for use in unit tests
#'
#' @format A data frame with 500 rows (individuals) and 10 
#' variables (PCs)
#'
#' @source Manually created
#'
#' @keywords data
#'
NULL

#' @name MAPITR_SimData_Genotypes
#'
#' @title MAPITR SimData Genotypes
#'
#' @docType data
#'
#' @description A simulated dataset of genotypes for use in 
#' vignettes
#'
#' @format A data frame with 500 rows (individuals) and 750 
#' variables (SNPs)
#'
#' @source Manually created
#'
#' @keywords data
#'
NULL

#' @name MAPITR_SimData_Phenotype
#'
#' @title MAPITR SimData Phenotype
#'
#' @docType data
#'
#' @description A simulated set of phenotypes for use in
#' vignettes
#'
#' @format A data frame with 500 rows (individuals) and 1 variables 
#' (phenotype)
#'
#' @source Manually created
#'
#' @keywords data
#'
NULL

#' @name MAPITR_SimData_Pathways
#'
#' @title MAPITR SimData Pathways
#'
#' @docType data
#'
#' @description A simulated set of pathways for use in 
#' vignettes
#'
#' @format A data frame with 5 rows (pathways) and 2 variables 
#' (pathway name, comma-separated list of pathway column indices)
#'
#' @source Manually created
#'
#' @keywords data
#'
NULL

#' @name MAPITR_SimData_PCs
#'
#' @title MAPITR SimData PCs
#'
#' @docType data
#'
#' @description Top 10 principal components from the simulated
#' genotypes for for use in vignettes
#'
#' @format A data frame with 500 rows (individuals) and 10 
#' variables (PCs)
#'
#' @source Manually created
#'
#' @keywords data
#'
NULL