MCMCvis: Tools to Visualize, Manipulate, and Summarize MCMC Output

Performs key functions for MCMC analysis using minimal code - visualizes, manipulates, and summarizes MCMC output. Functions support simple and straightforward subsetting of model parameters within the calls, and produce presentable and 'publication-ready' output. MCMC output may be derived from Bayesian model output fit with JAGS, Stan, or other MCMC samplers.

Author
Casey Youngflesh
Date of publication
2016-10-06 20:09:44
Maintainer
Casey Youngflesh <caseyyoungflesh@gmail.com>
License
GPL-3
Version
0.6.3
URLs

View on CRAN

Man pages

MCMCchains
Extract posterior chains from MCMC output
MCMC_data
Simulated MCMC output data
MCMCplot
Caterpillar plots of posterior distributions from MCMC output
MCMCsummary
Summary function for MCMC output
MCMCtrace
Trace and density plots from MCMC output
MCMCvis
The 'MCMCvis' package

Files in this package

MCMCvis
MCMCvis/inst
MCMCvis/inst/doc
MCMCvis/inst/doc/MCMCvis.html
MCMCvis/inst/doc/MCMCvis.R
MCMCvis/inst/doc/MCMCvis.Rmd
MCMCvis/NAMESPACE
MCMCvis/data
MCMCvis/data/MCMC_data.rda
MCMCvis/data/datalist
MCMCvis/R
MCMCvis/R/MCMCchains.R
MCMCvis/R/MCMCtrace.R
MCMCvis/R/MCMCsummary.R
MCMCvis/R/data.R
MCMCvis/R/MCMCvis.R
MCMCvis/R/MCMCplot.R
MCMCvis/vignettes
MCMCvis/vignettes/MCMCvis.Rmd
MCMCvis/MD5
MCMCvis/build
MCMCvis/build/vignette.rds
MCMCvis/DESCRIPTION
MCMCvis/man
MCMCvis/man/MCMCchains.Rd
MCMCvis/man/MCMC_data.Rd
MCMCvis/man/MCMCvis.Rd
MCMCvis/man/MCMCsummary.Rd
MCMCvis/man/MCMCplot.Rd
MCMCvis/man/MCMCtrace.Rd