The multinomial diversity model is a toolbox for relating diversity to complex predictors. It is based on (1) Shannon diversity; (2) the multinomial logit model, and (3) the link between Shannon diversity and the log-likelihood of the MLM.

Author | Glenn De'ath <g.death@aims.gov.au>; Code for mdm was adapted from multinom in the nnet package (Brian Ripley <ripley@stats.ox.ac.uk> and Bill Venables <Bill.Venables@csiro.au>) |

Date of publication | 2013-07-10 11:12:01 |

Maintainer | Glenn De'ath <g.death@aims.gov.au> |

License | GPL-2 | GPL-3 |

Version | 1.3 |

**anova.mdm:** Analysis of Deviance, Entropy and Diversity Tables

**dev2div:** Converts deviances to diversities

**ed:** Calculate alpha, beta and gamma true entropies and...

**ed1:** Calculate alpha, beta and gamma true entropies and...

**eds:** Calculate alpha, beta and gamma parametric entropies and...

**eds1:** Calculate alpha, beta and gamma parametric entropies and...

**entropy.plot:** Entropy plot

**mdm:** Fits the parameteric diversity model

**MDM-package:** Multinomial Diversity Model

**simdata:** Species abundance data simulator

**spider6:** The spider data set

**y2p:** Scale rows of a species-sites data set

MDM

MDM/MD5

MDM/man

MDM/man/y2p.Rd
MDM/man/spider6.Rd
MDM/man/simdata.Rd
MDM/man/mdm.Rd
MDM/man/entropy.plot.Rd
MDM/man/eds1.Rd
MDM/man/eds.Rd
MDM/man/ed1.Rd
MDM/man/ed.Rd
MDM/man/dev2div.Rd
MDM/man/anova.mdm.Rd
MDM/man/MDM-package.Rd
MDM/demo

MDM/demo/spider6.R

MDM/demo/corals.R

MDM/demo/00Index

MDM/data

MDM/data/spider6.RData

MDM/R

MDM/R/y2p.R
MDM/R/simdata.R
MDM/R/mdm.R
MDM/R/entropy.plot.R
MDM/R/eds1.R
MDM/R/eds.R
MDM/R/ed1.R
MDM/R/ed.R
MDM/R/dev2div.R
MDM/R/anova.mdm.R
MDM/NAMESPACE

MDM/DESCRIPTION

MDM/CHANGES

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