MDimNormn: Multi-Dimensional MA Normalization for Plate Effect
Version 0.8.0

Normalize data to minimize the difference between sample plates (batch effects). For given data in a matrix and grouping variable (or plate), the function 'normn_MA' normalizes the data on MA coordinates. More details are in the citation. The primary method is 'Multi-MA'. Other fitting functions on MA coordinates can also be employed e.g. loess.

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AuthorMun-Gwan Hong
Date of publication2015-08-12 20:12:49
MaintainerMun-Gwan Hong <mun-gwan.hong@scilifelab.se>
LicenseGPL-3
Version0.8.0
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("MDimNormn")

Man pages

normalizeWithMA: Multi-dimensional MA normalization for plate effect
sba: Artificially generated data alike that of Suspension bead...

Functions

normn_MA Man page Source code
sba Man page

Files

inst
inst/CITATION
NAMESPACE
data
data/sba.rda
R
R/normalizeWithMA.R
MD5
DESCRIPTION
man
man/normalizeWithMA.Rd
man/sba.Rd
MDimNormn documentation built on May 29, 2017, 10:41 a.m.