annotate_tRF: Annotate a tRF sequence
In MINTplates: Encode "License-Plates" from Sequences and Decode Them Back
Description
Usage
Arguments
Value
References
Examples
Description
Obtain tRF ID, type, whether exclusive to tRNA space, and tRNA sources of the tRF with its sequence.
Usage
1
Arguments
sequence
tRF sequence.
Value
tRF ID, type, whether exclusive to tRNA space, and tRNA sources of the tRF.
References
Loher P, Telonis AG, Rigoutsos I. Sci Rep (2017) <doi: 10.1038/srep41184>
Examples
1
2
sequence='TCCCTGGTGGTCTAGTGGTTAGGATTCGGC'
annotate_tRF(sequence)
MINTplates documentation built on Sept. 5, 2021, 5:52 p.m.
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Description Usage Arguments Value References Examples
Description
Obtain tRF ID, type, whether exclusive to tRNA space, and tRNA sources of the tRF with its sequence.
Usage
1 |
Arguments
sequence |
tRF sequence. |
Value
tRF ID, type, whether exclusive to tRNA space, and tRNA sources of the tRF.
References
Loher P, Telonis AG, Rigoutsos I. Sci Rep (2017) <doi: 10.1038/srep41184>
Examples
1 2 | sequence='TCCCTGGTGGTCTAGTGGTTAGGATTCGGC'
annotate_tRF(sequence)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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