This package contains functions to carry out processing of high throughput data analysis and detection of putative hits/mutants. Contents include a function for post-hoc quality control for removal of outlier sample sets, a median-based normalization method for use in datasets where there are no explicit controls and where most of the responses are of the wildtype/no response class (see accompanying paper). The package also includes a way to prioritize individuals of interest using am empirical cumulative distribution function. Methods for generating synthetic data as well as data from the Chloroplast 2010 project are included.
|Author||Shannon M. Bell <[email protected]>, Lyle D. Burgoon <[email protected]>|
|Maintainer||Shannon M. Bell <[email protected]>|
|License||GPL (>= 3)|
|Package repository||View on CRAN|
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